Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRK2Q5S007 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRK2Q5S007 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRK2Q5S007 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRK2Q5S007 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRK2Q5S007 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRK2Q5S007 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRK2Q5S007 AC133561.5-201ENST00000635547 218 ntBASIC18.79■□□□□ 0.6
LRRK2Q5S007 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRK2Q5S007 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
LRRK2Q5S007 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRK2Q5S007 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRK2Q5S007 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRK2Q5S007 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRK2Q5S007 C2orf69P4-201ENST00000565394 541 ntBASIC18.78■□□□□ 0.6
LRRK2Q5S007 AC233702.5-201ENST00000584107 538 ntBASIC18.78■□□□□ 0.6
LRRK2Q5S007 AC069544.1-201ENST00000609399 999 ntBASIC18.78■□□□□ 0.6
LRRK2Q5S007 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRK2Q5S007 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRK2Q5S007 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
LRRK2Q5S007 POU5F1P4-201ENST00000413175 1085 ntBASIC18.78■□□□□ 0.6
LRRK2Q5S007 CD177P1-201ENST00000606252 935 ntBASIC18.78■□□□□ 0.6
LRRK2Q5S007 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRK2Q5S007 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRK2Q5S007 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRK2Q5S007 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRK2Q5S007 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LRRK2Q5S007 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRK2Q5S007 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
LRRK2Q5S007 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRK2Q5S007 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
LRRK2Q5S007 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRK2Q5S007 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRK2Q5S007 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRK2Q5S007 SOX15-203ENST00000570788 1093 ntBASIC18.76■□□□□ 0.59
LRRK2Q5S007 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRK2Q5S007 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRK2Q5S007 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRK2Q5S007 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRK2Q5S007 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRK2Q5S007 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRK2Q5S007 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRK2Q5S007 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.75■□□□□ 0.59
LRRK2Q5S007 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 PNMA6B-201ENST00000538162 1200 ntBASIC18.75■□□□□ 0.59
LRRK2Q5S007 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRK2Q5S007 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRK2Q5S007 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRK2Q5S007 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 MIR4785-201ENST00000585005 73 ntBASIC18.74■□□□□ 0.59
LRRK2Q5S007 AP001412.1-201ENST00000608405 714 ntBASIC18.74■□□□□ 0.59
LRRK2Q5S007 AC092865.7-201ENST00000641832 219 ntBASIC18.74■□□□□ 0.59
LRRK2Q5S007 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRK2Q5S007 AC022211.4-201ENST00000625094 2161 ntBASIC18.74■□□□□ 0.59
LRRK2Q5S007 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRK2Q5S007 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRK2Q5S007 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 KRT17P2-201ENST00000300992 1314 ntBASIC18.74■□□□□ 0.59
LRRK2Q5S007 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRK2Q5S007 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRK2Q5S007 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms