Protein–RNA interactions for Protein: Q58A44

PCOTH, Prostate collagen triple helix protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTHQ58A44 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 MIR6722-201ENST00000617286 78 ntBASIC12.34□□□□□ -0.43
PCOTHQ58A44 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PCOTHQ58A44 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCOTHQ58A44 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
PCOTHQ58A44 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
PCOTHQ58A44 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 AC092068.2-201ENST00000590491 1708 ntBASIC12.33□□□□□ -0.44
PCOTHQ58A44 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCOTHQ58A44 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.33□□□□□ -0.44
PCOTHQ58A44 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC12.32□□□□□ -0.44
PCOTHQ58A44 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCOTHQ58A44 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PCOTHQ58A44 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCOTHQ58A44 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
PCOTHQ58A44 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PCOTHQ58A44 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCOTHQ58A44 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCOTHQ58A44 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
PCOTHQ58A44 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCOTHQ58A44 AC004448.1-201ENST00000458332 883 ntBASIC12.31□□□□□ -0.44
PCOTHQ58A44 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms