Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM60Q495X7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM60Q495X7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM60Q495X7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM60Q495X7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM60Q495X7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM60Q495X7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM60Q495X7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
TRIM60Q495X7 ABCB10P4-201ENST00000566803 2184 ntBASIC23.61■■□□□ 1.37
TRIM60Q495X7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM60Q495X7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM60Q495X7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM60Q495X7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM60Q495X7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM60Q495X7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM60Q495X7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM60Q495X7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM60Q495X7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM60Q495X7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.6■■□□□ 1.37
TRIM60Q495X7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM60Q495X7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM60Q495X7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM60Q495X7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TRIM60Q495X7 AC073648.6-201ENST00000641589 218 ntBASIC23.6■■□□□ 1.37
TRIM60Q495X7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM60Q495X7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM60Q495X7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM60Q495X7 AC010980.2-201ENST00000587099 1412 ntBASIC23.59■■□□□ 1.37
TRIM60Q495X7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM60Q495X7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 AC026366.1-201ENST00000488803 879 ntBASIC23.59■■□□□ 1.37
TRIM60Q495X7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM60Q495X7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TRIM60Q495X7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM60Q495X7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM60Q495X7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM60Q495X7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM60Q495X7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.58■■□□□ 1.37
TRIM60Q495X7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 UNC93B5-201ENST00000530315 699 ntBASIC23.58■■□□□ 1.37
TRIM60Q495X7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM60Q495X7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM60Q495X7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM60Q495X7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM60Q495X7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM60Q495X7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TRIM60Q495X7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM60Q495X7 AC008550.1-201ENST00000511500 884 ntBASIC23.57■■□□□ 1.36
TRIM60Q495X7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.57■■□□□ 1.36
TRIM60Q495X7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TRIM60Q495X7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
TRIM60Q495X7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TRIM60Q495X7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM60Q495X7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TRIM60Q495X7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM60Q495X7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM60Q495X7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM60Q495X7 AP003097.1-201ENST00000530657 1135 ntBASIC23.56■■□□□ 1.36
TRIM60Q495X7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms