Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 MIR638-201ENST00000385237 100 ntBASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 AC142381.2-201ENST00000566120 298 ntBASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 AC104564.3-201ENST00000582367 638 ntBASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 AC055733.4-201ENST00000638462 1354 ntBASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 BX005040.4-201ENST00000637145 1518 ntBASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO1Q2MKA7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
RSPO1Q2MKA7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.52■□□□□ 0.55
RSPO1Q2MKA7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RSPO1Q2MKA7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.52■□□□□ 0.55
RSPO1Q2MKA7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 AC009237.3-201ENST00000393279 1427 ntBASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 AC012414.1-201ENST00000556676 535 ntBASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 AC005229.4-201ENST00000610085 2198 ntBASIC18.51■□□□□ 0.55
RSPO1Q2MKA7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 AC005224.4-201ENST00000583262 1652 ntBASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 FEM1AP4-201ENST00000443167 1987 ntBASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO1Q2MKA7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.49■□□□□ 0.55
RSPO1Q2MKA7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO1Q2MKA7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO1Q2MKA7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.49■□□□□ 0.55
RSPO1Q2MKA7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RSPO1Q2MKA7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.49■□□□□ 0.55
RSPO1Q2MKA7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms