Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
NKX6-1P78426 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
NKX6-1P78426 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX6-1P78426 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.72■□□□□ 0.59
NKX6-1P78426 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 KRT18P61-201ENST00000585825 1298 ntBASIC18.72■□□□□ 0.59
NKX6-1P78426 SMUG1P1-201ENST00000590640 811 ntBASIC18.72■□□□□ 0.59
NKX6-1P78426 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 AL024507.2-201ENST00000606070 2574 ntBASIC18.72■□□□□ 0.59
NKX6-1P78426 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-1P78426 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX6-1P78426 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NKX6-1P78426 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NKX6-1P78426 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-1P78426 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NKX6-1P78426 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-1P78426 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-1P78426 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX6-1P78426 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-1P78426 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-1P78426 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.71■□□□□ 0.59
NKX6-1P78426 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX6-1P78426 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX6-1P78426 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX6-1P78426 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX6-1P78426 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-1P78426 TMEM191A-211ENST00000637163 1067 ntBASIC18.71■□□□□ 0.59
NKX6-1P78426 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX6-1P78426 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-1P78426 ESRRAP2-201ENST00000418437 1549 ntBASIC18.7■□□□□ 0.58
NKX6-1P78426 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-1P78426 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-1P78426 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX6-1P78426 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-1P78426 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-1P78426 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-1P78426 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
NKX6-1P78426 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
NKX6-1P78426 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 AC087742.1-201ENST00000575880 1738 ntBASIC18.69■□□□□ 0.58
NKX6-1P78426 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
NKX6-1P78426 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.69■□□□□ 0.58
NKX6-1P78426 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-1P78426 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.69■□□□□ 0.58
NKX6-1P78426 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
NKX6-1P78426 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NKX6-1P78426 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NKX6-1P78426 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.68■□□□□ 0.58
NKX6-1P78426 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.68■□□□□ 0.58
NKX6-1P78426 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.68■□□□□ 0.58
NKX6-1P78426 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 AC079089.2-201ENST00000531211 1277 ntBASIC18.68■□□□□ 0.58
NKX6-1P78426 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.68■□□□□ 0.58
NKX6-1P78426 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.68■□□□□ 0.58
NKX6-1P78426 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NKX6-1P78426 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NKX6-1P78426 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-1P78426 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX6-1P78426 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 AP004607.4-201ENST00000530158 1459 ntBASIC18.67■□□□□ 0.58
NKX6-1P78426 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NKX6-1P78426 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NKX6-1P78426 KRT19P1-201ENST00000405746 1186 ntBASIC18.67■□□□□ 0.58
NKX6-1P78426 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NKX6-1P78426 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.67■□□□□ 0.58
NKX6-1P78426 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-1P78426 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NKX6-1P78426 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NKX6-1P78426 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-1P78426 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-1P78426 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX6-1P78426 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms