Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.84■□□□□ 0.93
YBX1P67809 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
YBX1P67809 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
YBX1P67809 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
YBX1P67809 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.84■□□□□ 0.93
YBX1P67809 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
YBX1P67809 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.84■□□□□ 0.93
YBX1P67809 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.84■□□□□ 0.93
YBX1P67809 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.84■□□□□ 0.93
YBX1P67809 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
YBX1P67809 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
YBX1P67809 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.84■□□□□ 0.93
YBX1P67809 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.84■□□□□ 0.93
YBX1P67809 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
YBX1P67809 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
YBX1P67809 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
YBX1P67809 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
YBX1P67809 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.83■□□□□ 0.93
YBX1P67809 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.83■□□□□ 0.93
YBX1P67809 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.83■□□□□ 0.93
YBX1P67809 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.83■□□□□ 0.93
YBX1P67809 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
YBX1P67809 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
YBX1P67809 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
YBX1P67809 AC012414.1-201ENST00000556676 535 ntBASIC20.83■□□□□ 0.93
YBX1P67809 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
YBX1P67809 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.83■□□□□ 0.92
YBX1P67809 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
YBX1P67809 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.82■□□□□ 0.92
YBX1P67809 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.82■□□□□ 0.92
YBX1P67809 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YBX1P67809 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.82■□□□□ 0.92
YBX1P67809 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.81■□□□□ 0.92
YBX1P67809 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.81■□□□□ 0.92
YBX1P67809 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
YBX1P67809 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
YBX1P67809 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
YBX1P67809 OR7E47P-201ENST00000546390 1422 ntBASIC20.81■□□□□ 0.92
YBX1P67809 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
YBX1P67809 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
YBX1P67809 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.81■□□□□ 0.92
YBX1P67809 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.81■□□□□ 0.92
YBX1P67809 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.81■□□□□ 0.92
YBX1P67809 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.81■□□□□ 0.92
YBX1P67809 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.81■□□□□ 0.92
YBX1P67809 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
YBX1P67809 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
YBX1P67809 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
YBX1P67809 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.8■□□□□ 0.92
YBX1P67809 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
YBX1P67809 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
YBX1P67809 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
YBX1P67809 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
YBX1P67809 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
YBX1P67809 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.8■□□□□ 0.92
YBX1P67809 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.79■□□□□ 0.92
YBX1P67809 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.79■□□□□ 0.92
YBX1P67809 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
YBX1P67809 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.79■□□□□ 0.92
YBX1P67809 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
YBX1P67809 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.79■□□□□ 0.92
YBX1P67809 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.79■□□□□ 0.92
YBX1P67809 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.79■□□□□ 0.92
YBX1P67809 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.79■□□□□ 0.92
YBX1P67809 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.79■□□□□ 0.92
YBX1P67809 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.79■□□□□ 0.92
YBX1P67809 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YBX1P67809 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
YBX1P67809 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YBX1P67809 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
YBX1P67809 AC026471.6-201ENST00000622954 1905 ntBASIC20.78■□□□□ 0.92
YBX1P67809 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YBX1P67809 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YBX1P67809 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.78■□□□□ 0.92
YBX1P67809 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.78■□□□□ 0.92
YBX1P67809 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YBX1P67809 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.78■□□□□ 0.92
YBX1P67809 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.78■□□□□ 0.92
YBX1P67809 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YBX1P67809 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
YBX1P67809 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.78■□□□□ 0.92
YBX1P67809 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms