Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS4XP62701 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS4XP62701 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4XP62701 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPS4XP62701 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4XP62701 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4XP62701 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.28■□□□□ 0.68
RPS4XP62701 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4XP62701 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4XP62701 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.28■□□□□ 0.68
RPS4XP62701 BX842568.3-201ENST00000418104 571 ntBASIC19.28■□□□□ 0.68
RPS4XP62701 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.28■□□□□ 0.68
RPS4XP62701 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4XP62701 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.28■□□□□ 0.68
RPS4XP62701 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RPS4XP62701 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS4XP62701 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
RPS4XP62701 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS4XP62701 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS4XP62701 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.27■□□□□ 0.68
RPS4XP62701 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.27■□□□□ 0.68
RPS4XP62701 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS4XP62701 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.27■□□□□ 0.68
RPS4XP62701 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.27■□□□□ 0.68
RPS4XP62701 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.27■□□□□ 0.68
RPS4XP62701 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS4XP62701 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.27■□□□□ 0.68
RPS4XP62701 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPS4XP62701 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RPS4XP62701 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4XP62701 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4XP62701 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4XP62701 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4XP62701 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RPS4XP62701 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.26■□□□□ 0.67
RPS4XP62701 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.26■□□□□ 0.67
RPS4XP62701 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RPS4XP62701 AC087623.3-201ENST00000607047 1098 ntBASIC19.26■□□□□ 0.67
RPS4XP62701 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4XP62701 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.26■□□□□ 0.67
RPS4XP62701 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4XP62701 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
RPS4XP62701 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS4XP62701 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS4XP62701 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RPS4XP62701 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
RPS4XP62701 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.25■□□□□ 0.67
RPS4XP62701 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4XP62701 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.25■□□□□ 0.67
RPS4XP62701 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
RPS4XP62701 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.24■□□□□ 0.67
RPS4XP62701 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS4XP62701 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS4XP62701 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS4XP62701 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.24■□□□□ 0.67
RPS4XP62701 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 AP004607.7-201ENST00000527152 1677 ntBASIC19.24■□□□□ 0.67
RPS4XP62701 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4XP62701 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.24■□□□□ 0.67
RPS4XP62701 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.23■□□□□ 0.67
RPS4XP62701 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4XP62701 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.23■□□□□ 0.67
RPS4XP62701 AL162430.1-201ENST00000480705 870 ntBASIC19.23■□□□□ 0.67
RPS4XP62701 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.23■□□□□ 0.67
RPS4XP62701 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4XP62701 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4XP62701 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4XP62701 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4XP62701 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
RPS4XP62701 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4XP62701 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4XP62701 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4XP62701 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4XP62701 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4XP62701 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4XP62701 AC126544.1-201ENST00000580842 1059 ntBASIC19.22■□□□□ 0.67
RPS4XP62701 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS4XP62701 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS4XP62701 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.22■□□□□ 0.67
RPS4XP62701 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RPS4XP62701 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4XP62701 AC005229.4-201ENST00000610085 2198 ntBASIC19.22■□□□□ 0.67
RPS4XP62701 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms