Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SPCS3P61009 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.28■□□□□ 0.36
SPCS3P61009 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.28■□□□□ 0.36
SPCS3P61009 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS3P61009 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.28■□□□□ 0.36
SPCS3P61009 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPCS3P61009 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SPCS3P61009 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPCS3P61009 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPCS3P61009 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPCS3P61009 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPCS3P61009 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.27■□□□□ 0.36
SPCS3P61009 AC104564.3-201ENST00000582367 638 ntBASIC17.27■□□□□ 0.36
SPCS3P61009 AL117332.1-201ENST00000622628 974 ntBASIC17.27■□□□□ 0.36
SPCS3P61009 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.27■□□□□ 0.36
SPCS3P61009 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SPCS3P61009 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.27■□□□□ 0.36
SPCS3P61009 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.27■□□□□ 0.36
SPCS3P61009 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.27■□□□□ 0.36
SPCS3P61009 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPCS3P61009 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
SPCS3P61009 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SPCS3P61009 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPCS3P61009 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SPCS3P61009 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.27■□□□□ 0.35
SPCS3P61009 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
SPCS3P61009 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.26■□□□□ 0.35
SPCS3P61009 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 TSPY9P-201ENST00000440215 945 ntBASIC17.26■□□□□ 0.35
SPCS3P61009 TSPY11P-201ENST00000442607 1045 ntBASIC17.26■□□□□ 0.35
SPCS3P61009 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.26■□□□□ 0.35
SPCS3P61009 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SPCS3P61009 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.26■□□□□ 0.35
SPCS3P61009 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS3P61009 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.26■□□□□ 0.35
SPCS3P61009 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPCS3P61009 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.25■□□□□ 0.35
SPCS3P61009 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 OR7E47P-201ENST00000546390 1422 ntBASIC17.25■□□□□ 0.35
SPCS3P61009 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPCS3P61009 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.25■□□□□ 0.35
SPCS3P61009 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.25■□□□□ 0.35
SPCS3P61009 AC239859.2-201ENST00000444165 318 ntBASIC17.25■□□□□ 0.35
SPCS3P61009 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SPCS3P61009 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 FEM1AP4-201ENST00000443167 1987 ntBASIC17.25■□□□□ 0.35
SPCS3P61009 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS3P61009 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SPCS3P61009 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.25■□□□□ 0.35
SPCS3P61009 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS3P61009 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS3P61009 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS3P61009 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
SPCS3P61009 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS3P61009 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SPCS3P61009 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.24■□□□□ 0.35
SPCS3P61009 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS3P61009 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.24■□□□□ 0.35
SPCS3P61009 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.24■□□□□ 0.35
SPCS3P61009 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.24■□□□□ 0.35
SPCS3P61009 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
SPCS3P61009 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.24■□□□□ 0.35
SPCS3P61009 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.24■□□□□ 0.35
SPCS3P61009 AC133637.1-201ENST00000624115 1537 ntBASIC17.24■□□□□ 0.35
SPCS3P61009 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS3P61009 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS3P61009 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SPCS3P61009 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
SPCS3P61009 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SPCS3P61009 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.23■□□□□ 0.35
SPCS3P61009 AC068587.7-201ENST00000641602 218 ntBASIC17.23■□□□□ 0.35
SPCS3P61009 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 970.7 ms