Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDC42P60953 AC021242.3-201ENST00000607598 1377 ntBASIC19.46■□□□□ 0.71
CDC42P60953 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDC42P60953 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDC42P60953 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC42P60953 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC42P60953 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42P60953 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42P60953 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDC42P60953 AC103834.1-201ENST00000520383 144 ntBASIC19.46■□□□□ 0.71
CDC42P60953 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CDC42P60953 AC026471.6-201ENST00000622954 1905 ntBASIC19.46■□□□□ 0.71
CDC42P60953 AC092667.1-201ENST00000434301 2586 ntBASIC19.46■□□□□ 0.71
CDC42P60953 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDC42P60953 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42P60953 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42P60953 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC42P60953 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42P60953 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDC42P60953 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.45■□□□□ 0.7
CDC42P60953 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42P60953 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42P60953 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42P60953 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CDC42P60953 AL499627.2-201ENST00000606283 725 ntBASIC19.45■□□□□ 0.7
CDC42P60953 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDC42P60953 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.45■□□□□ 0.7
CDC42P60953 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDC42P60953 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42P60953 OR7E47P-201ENST00000546390 1422 ntBASIC19.44■□□□□ 0.7
CDC42P60953 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.44■□□□□ 0.7
CDC42P60953 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42P60953 LINC01006-201ENST00000333319 2292 ntBASIC19.44■□□□□ 0.7
CDC42P60953 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDC42P60953 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42P60953 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDC42P60953 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CDC42P60953 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42P60953 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42P60953 AC012354.3-201ENST00000623734 483 ntBASIC19.43■□□□□ 0.7
CDC42P60953 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDC42P60953 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.43■□□□□ 0.7
CDC42P60953 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42P60953 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42P60953 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42P60953 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42P60953 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.42■□□□□ 0.7
CDC42P60953 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CDC42P60953 AL031848.2-201ENST00000607670 837 ntBASIC19.42■□□□□ 0.7
CDC42P60953 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.42■□□□□ 0.7
CDC42P60953 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.42■□□□□ 0.7
CDC42P60953 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CDC42P60953 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42P60953 KRT8P33-201ENST00000508125 1423 ntBASIC19.42■□□□□ 0.7
CDC42P60953 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42P60953 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42P60953 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42P60953 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42P60953 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42P60953 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42P60953 BX664725.1-201ENST00000438252 379 ntBASIC19.41■□□□□ 0.7
CDC42P60953 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDC42P60953 AL031602.1-201ENST00000633169 911 ntBASIC19.41■□□□□ 0.7
CDC42P60953 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42P60953 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42P60953 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDC42P60953 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms