Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLDN20P56880 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLDN20P56880 AC073130.3-201ENST00000624389 2278 ntBASIC19.5■□□□□ 0.71
CLDN20P56880 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN20P56880 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN20P56880 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLDN20P56880 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN20P56880 YBX1P1-201ENST00000445822 960 ntBASIC19.5■□□□□ 0.71
CLDN20P56880 AC087623.3-201ENST00000607047 1098 ntBASIC19.5■□□□□ 0.71
CLDN20P56880 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLDN20P56880 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CLDN20P56880 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN20P56880 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN20P56880 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.49■□□□□ 0.71
CLDN20P56880 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN20P56880 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN20P56880 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLDN20P56880 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN20P56880 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN20P56880 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN20P56880 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN20P56880 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN20P56880 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN20P56880 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN20P56880 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN20P56880 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN20P56880 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN20P56880 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CLDN20P56880 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN20P56880 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CLDN20P56880 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN20P56880 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN20P56880 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN20P56880 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN20P56880 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLDN20P56880 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN20P56880 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN20P56880 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.47■□□□□ 0.71
CLDN20P56880 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN20P56880 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.47■□□□□ 0.71
CLDN20P56880 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN20P56880 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN20P56880 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN20P56880 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN20P56880 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN20P56880 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 PKD1P6-201ENST00000343738 4769 ntBASIC19.46■□□□□ 0.71
CLDN20P56880 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN20P56880 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN20P56880 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLDN20P56880 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN20P56880 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN20P56880 ESRRAP2-201ENST00000418437 1549 ntBASIC19.46■□□□□ 0.71
CLDN20P56880 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN20P56880 BX005040.4-201ENST00000637145 1518 ntBASIC19.46■□□□□ 0.71
CLDN20P56880 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 AC123595.1-201ENST00000440769 1046 ntBASIC19.45■□□□□ 0.7
CLDN20P56880 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN20P56880 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.45■□□□□ 0.7
CLDN20P56880 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN20P56880 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN20P56880 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLDN20P56880 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms