Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN15P56746 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN15P56746 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN15P56746 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN15P56746 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLDN15P56746 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN15P56746 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN15P56746 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN15P56746 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN15P56746 GUSBP5-202ENST00000510805 1989 ntBASIC19.19■□□□□ 0.66
CLDN15P56746 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN15P56746 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLDN15P56746 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN15P56746 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLDN15P56746 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN15P56746 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN15P56746 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN15P56746 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN15P56746 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLDN15P56746 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN15P56746 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN15P56746 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN15P56746 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN15P56746 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN15P56746 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN15P56746 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN15P56746 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN15P56746 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN15P56746 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN15P56746 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN15P56746 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN15P56746 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN15P56746 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLDN15P56746 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN15P56746 KRT87P-202ENST00000534226 1464 ntBASIC19.16■□□□□ 0.66
CLDN15P56746 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 AC026471.6-201ENST00000622954 1905 ntBASIC19.16■□□□□ 0.66
CLDN15P56746 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN15P56746 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.16■□□□□ 0.66
CLDN15P56746 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN15P56746 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN15P56746 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN15P56746 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN15P56746 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN15P56746 AC242852.2-201ENST00000615738 1807 ntBASIC19.16■□□□□ 0.66
CLDN15P56746 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CLDN15P56746 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN15P56746 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN15P56746 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN15P56746 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN15P56746 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN15P56746 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.15■□□□□ 0.66
CLDN15P56746 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN15P56746 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN15P56746 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN15P56746 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN15P56746 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN15P56746 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN15P56746 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN15P56746 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN15P56746 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN15P56746 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN15P56746 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.14■□□□□ 0.65
CLDN15P56746 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN15P56746 AC104187.1-201ENST00000607510 612 ntBASIC19.14■□□□□ 0.65
CLDN15P56746 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN15P56746 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN15P56746 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN15P56746 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN15P56746 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN15P56746 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN15P56746 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN15P56746 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN15P56746 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN15P56746 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CLDN15P56746 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN15P56746 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN15P56746 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN15P56746 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN15P56746 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN15P56746 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLDN15P56746 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN15P56746 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms