Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PER3P56645 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PER3P56645 AL353803.4-201ENST00000565882 1934 ntBASIC19.64■□□□□ 0.74
PER3P56645 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PER3P56645 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PER3P56645 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PER3P56645 GPX1P1-201ENST00000388829 606 ntBASIC19.64■□□□□ 0.73
PER3P56645 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PER3P56645 CD99P1-205ENST00000527459 561 ntBASIC19.64■□□□□ 0.73
PER3P56645 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.64■□□□□ 0.73
PER3P56645 TPRG1LP1-201ENST00000598702 760 ntBASIC19.64■□□□□ 0.73
PER3P56645 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PER3P56645 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PER3P56645 ESRRAP2-201ENST00000418437 1549 ntBASIC19.64■□□□□ 0.73
PER3P56645 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PER3P56645 AC004687.1-201ENST00000579003 1625 ntBASIC19.64■□□□□ 0.73
PER3P56645 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PER3P56645 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PER3P56645 AC127496.7-201ENST00000625110 1798 ntBASIC19.64■□□□□ 0.73
PER3P56645 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PER3P56645 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.64■□□□□ 0.73
PER3P56645 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.64■□□□□ 0.73
PER3P56645 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PER3P56645 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PER3P56645 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.63■□□□□ 0.73
PER3P56645 LINC00526-201ENST00000581067 1875 ntBASIC19.63■□□□□ 0.73
PER3P56645 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.63■□□□□ 0.73
PER3P56645 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PER3P56645 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PER3P56645 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.63■□□□□ 0.73
PER3P56645 AP004607.4-201ENST00000530158 1459 ntBASIC19.63■□□□□ 0.73
PER3P56645 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.63■□□□□ 0.73
PER3P56645 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.63■□□□□ 0.73
PER3P56645 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PER3P56645 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PER3P56645 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PER3P56645 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.62■□□□□ 0.73
PER3P56645 AC004854.2-201ENST00000608450 1441 ntBASIC19.62■□□□□ 0.73
PER3P56645 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PER3P56645 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PER3P56645 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.62■□□□□ 0.73
PER3P56645 CROCCP5-201ENST00000436658 830 ntBASIC19.62■□□□□ 0.73
PER3P56645 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.62■□□□□ 0.73
PER3P56645 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
PER3P56645 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.62■□□□□ 0.73
PER3P56645 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PER3P56645 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.62■□□□□ 0.73
PER3P56645 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PER3P56645 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PER3P56645 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PER3P56645 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PER3P56645 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.61■□□□□ 0.73
PER3P56645 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.61■□□□□ 0.73
PER3P56645 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PER3P56645 MIR663A-201ENST00000385250 93 ntBASIC19.61■□□□□ 0.73
PER3P56645 KRT18P61-201ENST00000585825 1298 ntBASIC19.61■□□□□ 0.73
PER3P56645 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.61■□□□□ 0.73
PER3P56645 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PER3P56645 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PER3P56645 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.61■□□□□ 0.73
PER3P56645 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.6■□□□□ 0.73
PER3P56645 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.6■□□□□ 0.73
PER3P56645 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PER3P56645 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.6■□□□□ 0.73
PER3P56645 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PER3P56645 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.6■□□□□ 0.73
PER3P56645 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.6■□□□□ 0.73
PER3P56645 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.6■□□□□ 0.73
PER3P56645 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.6■□□□□ 0.73
PER3P56645 BX005040.4-201ENST00000637145 1518 ntBASIC19.6■□□□□ 0.73
PER3P56645 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PER3P56645 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PER3P56645 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PER3P56645 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms