Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP1S2P56377 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
AP1S2P56377 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP1S2P56377 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
AP1S2P56377 AC012414.1-201ENST00000556676 535 ntBASIC20.79■□□□□ 0.92
AP1S2P56377 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
AP1S2P56377 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.79■□□□□ 0.92
AP1S2P56377 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.79■□□□□ 0.92
AP1S2P56377 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP1S2P56377 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.78■□□□□ 0.92
AP1S2P56377 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.78■□□□□ 0.92
AP1S2P56377 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.78■□□□□ 0.92
AP1S2P56377 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
AP1S2P56377 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.78■□□□□ 0.92
AP1S2P56377 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
AP1S2P56377 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.78■□□□□ 0.92
AP1S2P56377 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.78■□□□□ 0.92
AP1S2P56377 AL354811.1-201ENST00000610286 706 ntBASIC20.78■□□□□ 0.92
AP1S2P56377 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP1S2P56377 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP1S2P56377 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP1S2P56377 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.77■□□□□ 0.92
AP1S2P56377 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP1S2P56377 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP1S2P56377 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP1S2P56377 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
AP1S2P56377 AL358852.1-201ENST00000623174 1268 ntBASIC20.77■□□□□ 0.92
AP1S2P56377 AC003102.1-202ENST00000563394 1796 ntBASIC20.77■□□□□ 0.91
AP1S2P56377 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.76■□□□□ 0.91
AP1S2P56377 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP1S2P56377 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP1S2P56377 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
AP1S2P56377 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP1S2P56377 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
AP1S2P56377 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP1S2P56377 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP1S2P56377 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
AP1S2P56377 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP1S2P56377 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.76■□□□□ 0.91
AP1S2P56377 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
AP1S2P56377 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S2P56377 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
AP1S2P56377 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S2P56377 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
AP1S2P56377 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.75■□□□□ 0.91
AP1S2P56377 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S2P56377 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S2P56377 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S2P56377 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.75■□□□□ 0.91
AP1S2P56377 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.75■□□□□ 0.91
AP1S2P56377 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.75■□□□□ 0.91
AP1S2P56377 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.75■□□□□ 0.91
AP1S2P56377 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.75■□□□□ 0.91
AP1S2P56377 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S2P56377 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S2P56377 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
AP1S2P56377 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 AC005224.4-201ENST00000583262 1652 ntBASIC20.74■□□□□ 0.91
AP1S2P56377 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 AC105265.2-201ENST00000467189 838 ntBASIC20.74■□□□□ 0.91
AP1S2P56377 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.74■□□□□ 0.91
AP1S2P56377 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.74■□□□□ 0.91
AP1S2P56377 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S2P56377 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
AP1S2P56377 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S2P56377 AC055733.4-201ENST00000638462 1354 ntBASIC20.73■□□□□ 0.91
AP1S2P56377 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S2P56377 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
AP1S2P56377 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
AP1S2P56377 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S2P56377 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S2P56377 IRS3P-201ENST00000223076 1006 ntBASIC20.73■□□□□ 0.91
AP1S2P56377 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
AP1S2P56377 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.73■□□□□ 0.91
AP1S2P56377 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.73■□□□□ 0.91
AP1S2P56377 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S2P56377 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S2P56377 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.73■□□□□ 0.91
AP1S2P56377 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S2P56377 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.73■□□□□ 0.91
AP1S2P56377 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S2P56377 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
AP1S2P56377 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.72■□□□□ 0.91
AP1S2P56377 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S2P56377 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.72■□□□□ 0.91
AP1S2P56377 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
AP1S2P56377 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms