Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.37■□□□□ 0.69
SUMO3P55854 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SUMO3P55854 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.37■□□□□ 0.69
SUMO3P55854 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.36■□□□□ 0.69
SUMO3P55854 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.36■□□□□ 0.69
SUMO3P55854 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.36■□□□□ 0.69
SUMO3P55854 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SUMO3P55854 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 AC010542.4-201ENST00000563151 1910 ntBASIC19.36■□□□□ 0.69
SUMO3P55854 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.36■□□□□ 0.69
SUMO3P55854 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SUMO3P55854 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SUMO3P55854 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SUMO3P55854 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.36■□□□□ 0.69
SUMO3P55854 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SUMO3P55854 AC026471.6-201ENST00000622954 1905 ntBASIC19.35■□□□□ 0.69
SUMO3P55854 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.35■□□□□ 0.69
SUMO3P55854 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.35■□□□□ 0.69
SUMO3P55854 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.35■□□□□ 0.69
SUMO3P55854 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.35■□□□□ 0.69
SUMO3P55854 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SUMO3P55854 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.35■□□□□ 0.69
SUMO3P55854 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.35■□□□□ 0.69
SUMO3P55854 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.35■□□□□ 0.69
SUMO3P55854 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SUMO3P55854 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SUMO3P55854 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SUMO3P55854 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SUMO3P55854 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
SUMO3P55854 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
SUMO3P55854 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SUMO3P55854 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
SUMO3P55854 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SUMO3P55854 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SUMO3P55854 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SUMO3P55854 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SUMO3P55854 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SUMO3P55854 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SUMO3P55854 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.34■□□□□ 0.69
SUMO3P55854 AC079140.4-201ENST00000507448 529 ntBASIC19.34■□□□□ 0.69
SUMO3P55854 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.34■□□□□ 0.69
SUMO3P55854 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.34■□□□□ 0.69
SUMO3P55854 TERF1P2-201ENST00000583350 1212 ntBASIC19.34■□□□□ 0.69
SUMO3P55854 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.34■□□□□ 0.69
SUMO3P55854 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.34■□□□□ 0.69
SUMO3P55854 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.34■□□□□ 0.69
SUMO3P55854 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SUMO3P55854 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SUMO3P55854 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SUMO3P55854 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.33■□□□□ 0.69
SUMO3P55854 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SUMO3P55854 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SUMO3P55854 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.33■□□□□ 0.68
SUMO3P55854 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SUMO3P55854 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SUMO3P55854 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.33■□□□□ 0.68
SUMO3P55854 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SUMO3P55854 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SUMO3P55854 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SUMO3P55854 AC244015.2-201ENST00000616358 1861 ntBASIC19.33■□□□□ 0.68
SUMO3P55854 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SUMO3P55854 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SUMO3P55854 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
SUMO3P55854 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.32■□□□□ 0.68
SUMO3P55854 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.32■□□□□ 0.68
SUMO3P55854 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.32■□□□□ 0.68
SUMO3P55854 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.32■□□□□ 0.68
SUMO3P55854 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUMO3P55854 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.32■□□□□ 0.68
SUMO3P55854 LINC00565-201ENST00000562710 2331 ntBASIC19.31■□□□□ 0.68
SUMO3P55854 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUMO3P55854 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SUMO3P55854 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SUMO3P55854 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUMO3P55854 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.31■□□□□ 0.68
SUMO3P55854 KRT87P-202ENST00000534226 1464 ntBASIC19.31■□□□□ 0.68
SUMO3P55854 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SUMO3P55854 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.31■□□□□ 0.68
SUMO3P55854 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUMO3P55854 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms