Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 OMA1YKR087C 1038 nt3.1□□□□□ -1.91
YNL040WP53960 CSM3YMR048W 954 nt3.1□□□□□ -1.91
YNL040WP53960 MED11YMR112C 396 nt3.1□□□□□ -1.91
YNL040WP53960 CAT5YOR125C 702 nt3.1□□□□□ -1.91
YNL040WP53960 MIC60YKR016W 1623 nt3.1□□□□□ -1.91
YNL040WP53960 TRM12YML005W 1389 nt3.1□□□□□ -1.91
YNL040WP53960 CTM1YHR109W 1758 nt3.1□□□□□ -1.91
YNL040WP53960 PHO5YBR093C 1404 nt3.1□□□□□ -1.91
YNL040WP53960 ERG11YHR007C 1593 nt3.09□□□□□ -1.91
YNL040WP53960 SEC59YMR013C 1560 nt3.09□□□□□ -1.91
YNL040WP53960 HDA2YDR295C 2025 nt3.09□□□□□ -1.91
YNL040WP53960 TCP1YDR212W 1680 nt3.09□□□□□ -1.91
YNL040WP53960 RCY1YJL204C 2523 nt3.09□□□□□ -1.91
YNL040WP53960 PCL2YDL127W 927 nt3.09□□□□□ -1.91
YNL040WP53960 PDS1YDR113C 1122 nt3.09□□□□□ -1.91
YNL040WP53960 OKP1YGR179C 1221 nt3.09□□□□□ -1.91
YNL040WP53960 YKL091CYKL091C 933 nt3.09□□□□□ -1.91
YNL040WP53960 YLR012CYLR012C 300 nt3.09□□□□□ -1.91
YNL040WP53960 RRG9YNL213C 645 nt3.09□□□□□ -1.91
YNL040WP53960 YPL107WYPL107W 747 nt3.09□□□□□ -1.91
YNL040WP53960 MSB2YGR014W 3921 nt3.09□□□□□ -1.91
YNL040WP53960 TFC4YGR047C 3078 nt3.09□□□□□ -1.91
YNL040WP53960 ETP1YHL010C 1758 nt3.09□□□□□ -1.91
YNL040WP53960 GYP6YJL044C 1377 nt3.09□□□□□ -1.92
YNL040WP53960 KAP104YBR017C 2757 nt3.09□□□□□ -1.92
YNL040WP53960 PBS2YJL128C 2007 nt3.09□□□□□ -1.92
YNL040WP53960 YOR296WYOR296W 3870 nt3.08□□□□□ -1.92
YNL040WP53960 MSS4YDR208W 2340 nt3.08□□□□□ -1.92
YNL040WP53960 CTH1YDR151C 978 nt3.08□□□□□ -1.92
YNL040WP53960 YOS1YER074W-A 258 nt3.08□□□□□ -1.92
YNL040WP53960 POP6YGR030C 477 nt3.08□□□□□ -1.92
YNL040WP53960 YIR014WYIR014W 729 nt3.08□□□□□ -1.92
YNL040WP53960 SDH3YKL141W 597 nt3.08□□□□□ -1.92
YNL040WP53960 TFA2YKR062W 987 nt3.08□□□□□ -1.92
YNL040WP53960 TEM1YML064C 738 nt3.08□□□□□ -1.92
YNL040WP53960 POL3YDL102W 3294 nt3.08□□□□□ -1.92
YNL040WP53960 NEM1YHR004C 1341 nt3.08□□□□□ -1.92
YNL040WP53960 YOR365CYOR365C 2112 nt3.08□□□□□ -1.92
YNL040WP53960 PAM1YDR251W 2493 nt3.08□□□□□ -1.92
YNL040WP53960 FUN30YAL019W 3396 nt3.08□□□□□ -1.92
YNL040WP53960 RPA190YOR341W 4995 nt3.07□□□□□ -1.92
YNL040WP53960 YKL222CYKL222C 2118 nt3.07□□□□□ -1.92
YNL040WP53960 SNQ2YDR011W 4506 nt3.07□□□□□ -1.92
YNL040WP53960 YIR018C-AYIR018C-A 138 nt3.07□□□□□ -1.92
YNL040WP53960 GCD14YJL125C 1152 nt3.07□□□□□ -1.92
YNL040WP53960 ERP1YAR002C-A 660 nt3.07□□□□□ -1.92
YNL040WP53960 NIT3YLR351C 876 nt3.07□□□□□ -1.92
YNL040WP53960 UNG1YML021C 1080 nt3.07□□□□□ -1.92
YNL040WP53960 DDI3YNL335W 678 nt3.07□□□□□ -1.92
YNL040WP53960 YPR148CYPR148C 1308 nt3.07□□□□□ -1.92
YNL040WP53960 ACK1YDL203C 1872 nt3.07□□□□□ -1.92
YNL040WP53960 YPL109CYPL109C 1974 nt3.07□□□□□ -1.92
YNL040WP53960 RRP8YDR083W 1179 nt3.06□□□□□ -1.92
YNL040WP53960 YGR018CYGR018C 330 nt3.06□□□□□ -1.92
YNL040WP53960 SLI1YGR212W 1407 nt3.06□□□□□ -1.92
YNL040WP53960 YHL005CYHL005C 393 nt3.06□□□□□ -1.92
YNL040WP53960 PPX1YHR201C 1194 nt3.06□□□□□ -1.92
YNL040WP53960 RPS28BYLR264W 204 nt3.06□□□□□ -1.92
YNL040WP53960 YMR306C-AYMR306C-A 390 nt3.06□□□□□ -1.92
YNL040WP53960 IRC14YOR135C 342 nt3.06□□□□□ -1.92
YNL040WP53960 TPK2YPL203W 1143 nt3.06□□□□□ -1.92
YNL040WP53960 ROG1YGL144C 2058 nt3.05□□□□□ -1.92
YNL040WP53960 CDH1YGL003C 1701 nt3.05□□□□□ -1.92
YNL040WP53960 ACA1YER045C 1470 nt3.05□□□□□ -1.92
YNL040WP53960 TLC1TLC1 1301 nt3.05□□□□□ -1.92
YNL040WP53960 DID4YKL002W 699 nt3.05□□□□□ -1.92
YNL040WP53960 CYC2YOR037W 1101 nt3.05□□□□□ -1.92
YNL040WP53960 CAF20YOR276W 486 nt3.05□□□□□ -1.92
YNL040WP53960 MUM2YBR057C 1101 nt3.05□□□□□ -1.92
YNL040WP53960 GRX1YCL035C 333 nt3.05□□□□□ -1.92
YNL040WP53960 YME2YMR302C 2553 nt3.05□□□□□ -1.92
YNL040WP53960 SRC1YML034W 2505 nt3.04□□□□□ -1.92
YNL040WP53960 CLN2YPL256C 1638 nt3.04□□□□□ -1.92
YNL040WP53960 SPO71YDR104C 3738 nt3.04□□□□□ -1.92
YNL040WP53960 FAS1YKL182W 6156 nt3.04□□□□□ -1.92
YNL040WP53960 COM2YER130C 1332 nt3.04□□□□□ -1.92
YNL040WP53960 RRT13YER066W 558 nt3.04□□□□□ -1.92
YNL040WP53960 DDI2YFL061W 678 nt3.04□□□□□ -1.92
YNL040WP53960 MBB1YJL199C 327 nt3.04□□□□□ -1.92
YNL040WP53960 EBP2YKL172W 1284 nt3.04□□□□□ -1.92
YNL040WP53960 COA4YLR218C 453 nt3.04□□□□□ -1.92
YNL040WP53960 RIM9YMR063W 720 nt3.04□□□□□ -1.92
YNL040WP53960 YMR310CYMR310C 954 nt3.04□□□□□ -1.92
YNL040WP53960 TEX1YNL253W 1269 nt3.04□□□□□ -1.92
YNL040WP53960 SEC27YGL137W 2670 nt3.04□□□□□ -1.92
YNL040WP53960 CEP3YMR168C 1827 nt3.03□□□□□ -1.92
YNL040WP53960 DSF2YBR007C 2211 nt3.03□□□□□ -1.92
YNL040WP53960 RRM3YHR031C 2172 nt3.03□□□□□ -1.92
YNL040WP53960 YCR015CYCR015C 954 nt3.03□□□□□ -1.92
YNL040WP53960 DYN2YDR424C 279 nt3.03□□□□□ -1.92
YNL040WP53960 YGL258W-AYGL258W-A 234 nt3.03□□□□□ -1.92
YNL040WP53960 AML1YGR001C 747 nt3.03□□□□□ -1.92
YNL040WP53960 QCR10YHR001W-A 234 nt3.03□□□□□ -1.92
YNL040WP53960 YLL047WYLL047W 384 nt3.03□□□□□ -1.92
YNL040WP53960 RNH203YLR154C 333 nt3.03□□□□□ -1.92
YNL040WP53960 RPL6AYML073C 531 nt3.03□□□□□ -1.92
YNL040WP53960 BUD21YOR078W 645 nt3.03□□□□□ -1.92
YNL040WP53960 YOR263CYOR263C 408 nt3.03□□□□□ -1.92
YNL040WP53960 YPR136CYPR136C 513 nt3.03□□□□□ -1.92
YNL040WP53960 FRE4YNR060W 2160 nt3.02□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms