Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
NUBP1P53384 AC097493.4-201ENST00000641197 219 ntBASIC21.47■■□□□ 1.03
NUBP1P53384 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.47■■□□□ 1.03
NUBP1P53384 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUBP1P53384 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.46■■□□□ 1.03
NUBP1P53384 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NUBP1P53384 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUBP1P53384 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUBP1P53384 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUBP1P53384 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.46■■□□□ 1.03
NUBP1P53384 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUBP1P53384 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUBP1P53384 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.46■■□□□ 1.03
NUBP1P53384 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.46■■□□□ 1.03
NUBP1P53384 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUBP1P53384 DUSP8P4-201ENST00000399538 1761 ntBASIC21.46■■□□□ 1.03
NUBP1P53384 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
NUBP1P53384 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
NUBP1P53384 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUBP1P53384 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NUBP1P53384 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.45■■□□□ 1.02
NUBP1P53384 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NUBP1P53384 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.45■■□□□ 1.02
NUBP1P53384 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUBP1P53384 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.45■■□□□ 1.02
NUBP1P53384 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NUBP1P53384 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
NUBP1P53384 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 AC233702.5-201ENST00000584107 538 ntBASIC21.44■■□□□ 1.02
NUBP1P53384 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 AP001412.1-201ENST00000608405 714 ntBASIC21.44■■□□□ 1.02
NUBP1P53384 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NUBP1P53384 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUBP1P53384 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.44■■□□□ 1.02
NUBP1P53384 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NUBP1P53384 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.43■■□□□ 1.02
NUBP1P53384 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.43■■□□□ 1.02
NUBP1P53384 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.43■■□□□ 1.02
NUBP1P53384 AC008175.2-201ENST00000612840 297 ntBASIC21.43■■□□□ 1.02
NUBP1P53384 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUBP1P53384 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUBP1P53384 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.43■■□□□ 1.02
NUBP1P53384 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.43■■□□□ 1.02
NUBP1P53384 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.43■■□□□ 1.02
NUBP1P53384 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NUBP1P53384 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NUBP1P53384 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NUBP1P53384 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC21.42■■□□□ 1.02
NUBP1P53384 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
NUBP1P53384 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.42■■□□□ 1.02
NUBP1P53384 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
NUBP1P53384 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.42■■□□□ 1.02
NUBP1P53384 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
NUBP1P53384 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.42■■□□□ 1.02
NUBP1P53384 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.42■■□□□ 1.02
NUBP1P53384 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.42■■□□□ 1.02
NUBP1P53384 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.42■■□□□ 1.02
NUBP1P53384 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUBP1P53384 AL445228.2-201ENST00000605589 952 ntBASIC21.42■■□□□ 1.02
NUBP1P53384 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.42■■□□□ 1.02
NUBP1P53384 AC133561.5-201ENST00000635547 218 ntBASIC21.42■■□□□ 1.02
NUBP1P53384 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.41■■□□□ 1.02
NUBP1P53384 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.41■■□□□ 1.02
NUBP1P53384 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.41■■□□□ 1.02
NUBP1P53384 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUBP1P53384 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUBP1P53384 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NUBP1P53384 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.41■■□□□ 1.02
NUBP1P53384 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUBP1P53384 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.41■■□□□ 1.02
NUBP1P53384 AC012306.2-201ENST00000609350 630 ntBASIC21.41■■□□□ 1.02
NUBP1P53384 AC243732.1-201ENST00000612648 864 ntBASIC21.41■■□□□ 1.02
NUBP1P53384 PAX6-247ENST00000638965 979 ntTSL 5 BASIC21.41■■□□□ 1.02
NUBP1P53384 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
NUBP1P53384 RCN1P1-201ENST00000400413 996 ntBASIC21.4■■□□□ 1.02
NUBP1P53384 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.4■■□□□ 1.02
NUBP1P53384 POU5F1P4-201ENST00000413175 1085 ntBASIC21.4■■□□□ 1.02
NUBP1P53384 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.4■■□□□ 1.02
NUBP1P53384 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUBP1P53384 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.4■■□□□ 1.02
NUBP1P53384 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
NUBP1P53384 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.4■■□□□ 1.02
NUBP1P53384 DUSP8P5-201ENST00000422884 1815 ntBASIC21.4■■□□□ 1.02
NUBP1P53384 DUSP8P3-201ENST00000399571 1760 ntBASIC21.4■■□□□ 1.02
NUBP1P53384 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUBP1P53384 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
NUBP1P53384 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NUBP1P53384 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms