Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SLC25A1P53007 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC25A1P53007 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A1P53007 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A1P53007 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SLC25A1P53007 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC25A1P53007 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A1P53007 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A1P53007 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC25A1P53007 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC25A1P53007 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC25A1P53007 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A1P53007 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A1P53007 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A1P53007 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC25A1P53007 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC25A1P53007 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC25A1P53007 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC25A1P53007 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC25A1P53007 AC131281.2-201ENST00000520478 145 ntBASIC18.94■□□□□ 0.62
SLC25A1P53007 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC25A1P53007 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC25A1P53007 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC25A1P53007 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC25A1P53007 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SLC25A1P53007 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC25A1P53007 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC25A1P53007 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC25A1P53007 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC25A1P53007 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC25A1P53007 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SLC25A1P53007 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC25A1P53007 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
SLC25A1P53007 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
SLC25A1P53007 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC25A1P53007 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SLC25A1P53007 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC25A1P53007 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC25A1P53007 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC25A1P53007 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC25A1P53007 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC25A1P53007 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC25A1P53007 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC25A1P53007 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
SLC25A1P53007 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC25A1P53007 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLC25A1P53007 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC25A1P53007 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC25A1P53007 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A1P53007 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC25A1P53007 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 AP006587.3-201ENST00000525742 1516 ntBASIC18.91■□□□□ 0.62
SLC25A1P53007 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC25A1P53007 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC25A1P53007 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SLC25A1P53007 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC25A1P53007 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC25A1P53007 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC25A1P53007 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC25A1P53007 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC25A1P53007 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SLC25A1P53007 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC25A1P53007 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC25A1P53007 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC25A1P53007 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC25A1P53007 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC25A1P53007 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC25A1P53007 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC25A1P53007 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC25A1P53007 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC25A1P53007 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC25A1P53007 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC25A1P53007 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms