Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	SAP30	YMR263W	606 nt		4.26	□□□□□ -1.73
CAF16	P43569	YOR203W	YOR203W	354 nt		4.26	□□□□□ -1.73
CAF16	P43569	CUR1	YPR158W	759 nt		4.26	□□□□□ -1.73
CAF16	P43569	YCT1	YLL055W	1596 nt		4.26	□□□□□ -1.73
CAF16	P43569	APC4	YDR118W	1959 nt		4.25	□□□□□ -1.73
CAF16	P43569	SKG6	YHR149C	2205 nt		4.25	□□□□□ -1.73
CAF16	P43569	RRP42	YDL111C	798 nt		4.25	□□□□□ -1.73
CAF16	P43569	snR9	snR9	187 nt		4.25	□□□□□ -1.73
CAF16	P43569	YFR010W-A	YFR010W-A	189 nt		4.25	□□□□□ -1.73
CAF16	P43569	SYF2	YGR129W	648 nt		4.25	□□□□□ -1.73
CAF16	P43569	RPS4A	YJR145C	786 nt		4.25	□□□□□ -1.73
CAF16	P43569	PIR1	YKL164C	1026 nt		4.25	□□□□□ -1.73
CAF16	P43569	RNA14	YMR061W	2034 nt		4.25	□□□□□ -1.73
CAF16	P43569	YMR144W	YMR144W	1029 nt		4.25	□□□□□ -1.73
CAF16	P43569	YOL153C	YOL153C	1746 nt		4.25	□□□□□ -1.73
CAF16	P43569	YOR200W	YOR200W	399 nt		4.25	□□□□□ -1.73
CAF16	P43569	SPC29	YPL124W	762 nt		4.25	□□□□□ -1.73
CAF16	P43569	VAC7	YNL054W	3498 nt		4.25	□□□□□ -1.73
CAF16	P43569	SSB1	YDL229W	1842 nt		4.25	□□□□□ -1.73
CAF16	P43569	SSB2	YNL209W	1842 nt		4.25	□□□□□ -1.73
CAF16	P43569	NTA1	YJR062C	1374 nt		4.25	□□□□□ -1.73
CAF16	P43569	NAT1	YDL040C	2565 nt		4.24	□□□□□ -1.73
CAF16	P43569	TPO5	YKL174C	1857 nt		4.24	□□□□□ -1.73
CAF16	P43569	YCR085W	YCR085W	354 nt		4.24	□□□□□ -1.73
CAF16	P43569	PBP4	YDL053C	558 nt		4.24	□□□□□ -1.73
CAF16	P43569	YDL163W	YDL163W	303 nt		4.24	□□□□□ -1.73
CAF16	P43569	MFA1	YDR461W	111 nt		4.24	□□□□□ -1.73
CAF16	P43569	YGR022C	YGR022C	330 nt		4.24	□□□□□ -1.73
CAF16	P43569	TRX2	YGR209C	315 nt		4.24	□□□□□ -1.73
CAF16	P43569	SNX4	YJL036W	1272 nt		4.24	□□□□□ -1.73
CAF16	P43569	ENT3	YJR125C	1227 nt		4.24	□□□□□ -1.73
CAF16	P43569	RPL15B	YMR121C	615 nt		4.24	□□□□□ -1.73
CAF16	P43569	OCA2	YNL056W	594 nt		4.24	□□□□□ -1.73
CAF16	P43569	YNL109W	YNL109W	546 nt		4.24	□□□□□ -1.73
CAF16	P43569	YNL276C	YNL276C	396 nt		4.24	□□□□□ -1.73
CAF16	P43569	FUI1	YBL042C	1920 nt		4.23	□□□□□ -1.73
CAF16	P43569	HCM1	YCR065W	1695 nt		4.23	□□□□□ -1.73
CAF16	P43569	YCR097W-A	YCR097W-A	267 nt		4.23	□□□□□ -1.73
CAF16	P43569	RPS18A	YDR450W	441 nt		4.23	□□□□□ -1.73
CAF16	P43569	YGL159W	YGL159W	1113 nt		4.23	□□□□□ -1.73
CAF16	P43569	EMC2	YJR088C	879 nt		4.23	□□□□□ -1.73
CAF16	P43569	SWC7	YLR385C	399 nt		4.23	□□□□□ -1.73
CAF16	P43569	RPN13	YLR421C	471 nt		4.23	□□□□□ -1.73
CAF16	P43569	RPS19A	YOL121C	435 nt		4.23	□□□□□ -1.73
CAF16	P43569	SPN1	YPR133C	1233 nt		4.23	□□□□□ -1.73
CAF16	P43569	APD1	YBR151W	951 nt		4.23	□□□□□ -1.73
CAF16	P43569	NOP12	YOL041C	1380 nt		4.23	□□□□□ -1.73
CAF16	P43569	FAP1	YNL023C	2898 nt		4.23	□□□□□ -1.73
CAF16	P43569	DBP3	YGL078C	1572 nt		4.23	□□□□□ -1.73
CAF16	P43569	ANR2	YKL047W	1551 nt		4.23	□□□□□ -1.73
CAF16	P43569	PGS1	YCL004W	1566 nt		4.23	□□□□□ -1.73
CAF16	P43569	UPC2	YDR213W	2742 nt		4.23	□□□□□ -1.73
CAF16	P43569	GAL10	YBR019C	2100 nt		4.22	□□□□□ -1.73
CAF16	P43569	FAA1	YOR317W	2103 nt		4.22	□□□□□ -1.73
CAF16	P43569	SIN4	YNL236W	2925 nt		4.22	□□□□□ -1.73
CAF16	P43569	YDL016C	YDL016C	303 nt		4.22	□□□□□ -1.73
CAF16	P43569	BUR2	YLR226W	1188 nt		4.22	□□□□□ -1.73
CAF16	P43569	HUB1	YNR032C-A	222 nt		4.22	□□□□□ -1.73
CAF16	P43569	YOR169C	YOR169C	465 nt		4.22	□□□□□ -1.73
CAF16	P43569	YPR136C	YPR136C	513 nt		4.22	□□□□□ -1.73
CAF16	P43569	YPR170C	YPR170C	336 nt		4.22	□□□□□ -1.73
CAF16	P43569	THP1	YOL072W	1368 nt		4.22	□□□□□ -1.73
CAF16	P43569	AEP1	YMR064W	1557 nt		4.22	□□□□□ -1.73
CAF16	P43569	PHO84	YML123C	1764 nt		4.22	□□□□□ -1.73
CAF16	P43569	JJJ1	YNL227C	1773 nt		4.22	□□□□□ -1.73
CAF16	P43569	VPS45	YGL095C	1734 nt		4.21	□□□□□ -1.73
CAF16	P43569	NHX1	YDR456W	1902 nt		4.21	□□□□□ -1.74
CAF16	P43569	HMLALPHA2	YCL067C	633 nt		4.21	□□□□□ -1.74
CAF16	P43569	MATALPHA2	YCR039C	633 nt		4.21	□□□□□ -1.74
CAF16	P43569	MXR1	YER042W	555 nt		4.21	□□□□□ -1.74
CAF16	P43569	YGR182C	YGR182C	354 nt		4.21	□□□□□ -1.74
CAF16	P43569	LRP1	YHR081W	555 nt		4.21	□□□□□ -1.74
CAF16	P43569	RPF1	YHR088W	888 nt		4.21	□□□□□ -1.74
CAF16	P43569	ILM1	YJR118C	612 nt		4.21	□□□□□ -1.74
CAF16	P43569	COQ9	YLR201C	783 nt		4.21	□□□□□ -1.74
CAF16	P43569	ELA1	YNL230C	1140 nt		4.21	□□□□□ -1.74
CAF16	P43569	YNR075C-A	YNR075C-A	93 nt		4.21	□□□□□ -1.74
CAF16	P43569	YOL097W-A	YOL097W-A	186 nt		4.21	□□□□□ -1.74
CAF16	P43569	UTP23	YOR004W	765 nt		4.21	□□□□□ -1.74
CAF16	P43569	TOA1	YOR194C	861 nt		4.21	□□□□□ -1.74
CAF16	P43569	STP1	YDR463W	1560 nt		4.21	□□□□□ -1.74
CAF16	P43569	CHK1	YBR274W	1584 nt		4.21	□□□□□ -1.74
CAF16	P43569	AIM21	YIR003W	2040 nt		4.21	□□□□□ -1.74
CAF16	P43569	GMC1	YDR506C	1827 nt		4.21	□□□□□ -1.74
CAF16	P43569	MNN1	YER001W	2289 nt		4.2	□□□□□ -1.74
CAF16	P43569	PRM15	YMR278W	1869 nt		4.2	□□□□□ -1.74
CAF16	P43569	IMH1	YLR309C	2736 nt		4.2	□□□□□ -1.74
CAF16	P43569	SLX9	YGR081C	633 nt		4.2	□□□□□ -1.74
CAF16	P43569	YKL070W	YKL070W	510 nt		4.2	□□□□□ -1.74
CAF16	P43569	SRP21	YKL122C	504 nt		4.2	□□□□□ -1.74
CAF16	P43569	YLL044W	YLL044W	447 nt		4.2	□□□□□ -1.74
CAF16	P43569	YNL122C	YNL122C	348 nt		4.2	□□□□□ -1.74
CAF16	P43569	DAL82	YNL314W	768 nt		4.2	□□□□□ -1.74
CAF16	P43569	DDP1	YOR163W	567 nt		4.2	□□□□□ -1.74
CAF16	P43569	SUS1	YBR111W-A	291 nt		4.2	□□□□□ -1.74
CAF16	P43569	BUD5	YCR038C	1929 nt		4.2	□□□□□ -1.74
CAF16	P43569	TSR1	YDL060W	2367 nt		4.2	□□□□□ -1.74
CAF16	P43569	CDC15	YAR019C	2925 nt		4.19	□□□□□ -1.74
CAF16	P43569	FUS2	YMR232W	2034 nt		4.19	□□□□□ -1.74
CAF16	P43569	RTT106	YNL206C	1368 nt		4.19	□□□□□ -1.74

Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms