Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 LSM1YJL124C 519 nt2.51□□□□□ -2.01
SMD3P43321 YLR444CYLR444C 303 nt2.51□□□□□ -2.01
SMD3P43321 YMR122W-AYMR122W-A 255 nt2.51□□□□□ -2.01
SMD3P43321 IZH2YOL002C 954 nt2.51□□□□□ -2.01
SMD3P43321 YOR082CYOR082C 342 nt2.51□□□□□ -2.01
SMD3P43321 YPR077CYPR077C 372 nt2.51□□□□□ -2.01
SMD3P43321 ERG11YHR007C 1593 nt2.51□□□□□ -2.01
SMD3P43321 PBI1YPL272C 1554 nt2.51□□□□□ -2.01
SMD3P43321 CBP2YHL038C 1893 nt2.51□□□□□ -2.01
SMD3P43321 SHQ1YIL104C 1524 nt2.51□□□□□ -2.01
SMD3P43321 TSC11YER093C 4293 nt2.5□□□□□ -2.01
SMD3P43321 CEP3YMR168C 1827 nt2.5□□□□□ -2.01
SMD3P43321 RDI1YDL135C 609 nt2.5□□□□□ -2.01
SMD3P43321 RPL35BYDL136W 363 nt2.5□□□□□ -2.01
SMD3P43321 CLB3YDL155W 1284 nt2.5□□□□□ -2.01
SMD3P43321 LRS4YDR439W 1044 nt2.5□□□□□ -2.01
SMD3P43321 PBA1YLR199C 831 nt2.5□□□□□ -2.01
SMD3P43321 YMR178WYMR178W 825 nt2.5□□□□□ -2.01
SMD3P43321 AAH1YNL141W 1044 nt2.5□□□□□ -2.01
SMD3P43321 HUB1YNR032C-A 222 nt2.5□□□□□ -2.01
SMD3P43321 PFK27YOL136C 1194 nt2.5□□□□□ -2.01
SMD3P43321 YCL001W-AYCL001W-A 462 nt2.5□□□□□ -2.01
SMD3P43321 YDL199CYDL199C 2064 nt2.49□□□□□ -2.01
SMD3P43321 NOP4YPL043W 2058 nt2.49□□□□□ -2.01
SMD3P43321 PLM2YDR501W 1566 nt2.49□□□□□ -2.01
SMD3P43321 NMD2YHR077C 3270 nt2.49□□□□□ -2.01
SMD3P43321 YDL026WYDL026W 312 nt2.49□□□□□ -2.01
SMD3P43321 YDR340WYDR340W 303 nt2.49□□□□□ -2.01
SMD3P43321 tK(UUU)DtK(UUU)D 73 nt2.49□□□□□ -2.01
SMD3P43321 tK(UUU)G1tK(UUU)G1 73 nt2.49□□□□□ -2.01
SMD3P43321 tK(UUU)G2tK(UUU)G2 73 nt2.49□□□□□ -2.01
SMD3P43321 tK(UUU)KtK(UUU)K 73 nt2.49□□□□□ -2.01
SMD3P43321 tK(UUU)LtK(UUU)L 73 nt2.49□□□□□ -2.01
SMD3P43321 tK(UUU)OtK(UUU)O 73 nt2.49□□□□□ -2.01
SMD3P43321 tK(UUU)PtK(UUU)P 73 nt2.49□□□□□ -2.01
SMD3P43321 YHR086W-AYHR086W-A 162 nt2.49□□□□□ -2.01
SMD3P43321 RPS21BYJL136C 264 nt2.49□□□□□ -2.01
SMD3P43321 CPR7YJR032W 1182 nt2.49□□□□□ -2.01
SMD3P43321 YLR042CYLR042C 486 nt2.49□□□□□ -2.01
SMD3P43321 CSM3YMR048W 954 nt2.49□□□□□ -2.01
SMD3P43321 RUF20RUF20 443 nt2.49□□□□□ -2.01
SMD3P43321 SSU72YNL222W 621 nt2.49□□□□□ -2.01
SMD3P43321 YOR114WYOR114W 885 nt2.49□□□□□ -2.01
SMD3P43321 TIF4631YGR162W 2859 nt2.49□□□□□ -2.01
SMD3P43321 RAX2YLR084C 3663 nt2.49□□□□□ -2.01
SMD3P43321 YNR063WYNR063W 1824 nt2.49□□□□□ -2.01
SMD3P43321 ECM29YHL030W 5607 nt2.49□□□□□ -2.01
SMD3P43321 ECM18YDR125C 1362 nt2.49□□□□□ -2.01
SMD3P43321 BCS1YDR375C 1371 nt2.49□□□□□ -2.01
SMD3P43321 SKN7YHR206W 1869 nt2.48□□□□□ -2.01
SMD3P43321 ESL1YIL151C 3357 nt2.48□□□□□ -2.01
SMD3P43321 RIM1YCR028C-A 408 nt2.48□□□□□ -2.01
SMD3P43321 YDL186WYDL186W 834 nt2.48□□□□□ -2.01
SMD3P43321 PTI1YGR156W 1278 nt2.48□□□□□ -2.01
SMD3P43321 YHL005CYHL005C 393 nt2.48□□□□□ -2.01
SMD3P43321 YHR214C-DYHR214C-D 294 nt2.48□□□□□ -2.01
SMD3P43321 SGN1YIR001C 753 nt2.48□□□□□ -2.01
SMD3P43321 MAK16YAL025C 921 nt2.48□□□□□ -2.01
SMD3P43321 PCD1YLR151C 1023 nt2.48□□□□□ -2.01
SMD3P43321 HMX1YLR205C 954 nt2.48□□□□□ -2.01
SMD3P43321 YAR069CYAR069C 294 nt2.48□□□□□ -2.01
SMD3P43321 OCA2YNL056W 594 nt2.48□□□□□ -2.01
SMD3P43321 PPT2YPL148C 522 nt2.48□□□□□ -2.01
SMD3P43321 YPR074W-AYPR074W-A 171 nt2.48□□□□□ -2.01
SMD3P43321 YPR142CYPR142C 564 nt2.48□□□□□ -2.01
SMD3P43321 YBR116CYBR116C 528 nt2.48□□□□□ -2.01
SMD3P43321 AKR1YDR264C 2295 nt2.48□□□□□ -2.01
SMD3P43321 AEP2YMR282C 1743 nt2.48□□□□□ -2.01
SMD3P43321 PFF1YBR074W 2931 nt2.48□□□□□ -2.01
SMD3P43321 NTO1YPR031W 2247 nt2.48□□□□□ -2.01
SMD3P43321 SRB8YCR081W 4284 nt2.48□□□□□ -2.01
SMD3P43321 YJR061WYJR061W 2808 nt2.47□□□□□ -2.01
SMD3P43321 CDC20YGL116W 1833 nt2.47□□□□□ -2.01
SMD3P43321 SIN4YNL236W 2925 nt2.47□□□□□ -2.01
SMD3P43321 RAD55YDR076W 1221 nt2.47□□□□□ -2.01
SMD3P43321 YDR149CYDR149C 708 nt2.47□□□□□ -2.01
SMD3P43321 YDR355CYDR355C 303 nt2.47□□□□□ -2.01
SMD3P43321 PNC1YGL037C 651 nt2.47□□□□□ -2.01
SMD3P43321 LIF1YGL090W 1266 nt2.47□□□□□ -2.01
SMD3P43321 CFD1YIL003W 882 nt2.47□□□□□ -2.01
SMD3P43321 EBP2YKL172W 1284 nt2.47□□□□□ -2.01
SMD3P43321 MTD1YKR080W 963 nt2.47□□□□□ -2.01
SMD3P43321 MRPL20YKR085C 588 nt2.47□□□□□ -2.01
SMD3P43321 YLR154C-HYLR154C-H 132 nt2.47□□□□□ -2.01
SMD3P43321 YLR156C-AYLR156C-A 132 nt2.47□□□□□ -2.01
SMD3P43321 YLR157C-CYLR157C-C 132 nt2.47□□□□□ -2.01
SMD3P43321 YLR159C-AYLR159C-A 132 nt2.47□□□□□ -2.01
SMD3P43321 YLR230WYLR230W 306 nt2.47□□□□□ -2.01
SMD3P43321 YMR075C-AYMR075C-A 366 nt2.47□□□□□ -2.01
SMD3P43321 PEX11YOL147C 711 nt2.47□□□□□ -2.01
SMD3P43321 YOR238WYOR238W 912 nt2.47□□□□□ -2.01
SMD3P43321 HNT3YOR258W 654 nt2.47□□□□□ -2.01
SMD3P43321 ATP25YMR098C 1839 nt2.47□□□□□ -2.01
SMD3P43321 CYR1YJL005W 6081 nt2.47□□□□□ -2.01
SMD3P43321 ARG2YJL071W 1725 nt2.46□□□□□ -2.02
SMD3P43321 RPN4YDL020C 1596 nt2.46□□□□□ -2.02
SMD3P43321 FKH2YNL068C 2589 nt2.46□□□□□ -2.02
SMD3P43321 DBP5YOR046C 1449 nt2.46□□□□□ -2.02
SMD3P43321 YGL258W-AYGL258W-A 234 nt2.46□□□□□ -2.02
SMD3P43321 YML047W-AYML047W-A 366 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms