Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A3P43003 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A3P43003 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC1A3P43003 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLC1A3P43003 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC1A3P43003 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A3P43003 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A3P43003 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC1A3P43003 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A3P43003 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A3P43003 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A3P43003 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A3P43003 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC1A3P43003 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A3P43003 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC1A3P43003 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SLC1A3P43003 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC1A3P43003 RASA4CP-201ENST00000424092 1398 ntBASIC19.58■□□□□ 0.73
SLC1A3P43003 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC1A3P43003 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC1A3P43003 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SLC1A3P43003 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC1A3P43003 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A3P43003 MIR939-201ENST00000401314 82 ntBASIC19.58■□□□□ 0.72
SLC1A3P43003 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC1A3P43003 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC1A3P43003 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A3P43003 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A3P43003 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A3P43003 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A3P43003 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A3P43003 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A3P43003 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC1A3P43003 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC1A3P43003 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A3P43003 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A3P43003 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A3P43003 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.57■□□□□ 0.72
SLC1A3P43003 AL034346.1-201ENST00000568244 1277 ntBASIC19.57■□□□□ 0.72
SLC1A3P43003 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SLC1A3P43003 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.57■□□□□ 0.72
SLC1A3P43003 AL031432.3-201ENST00000607698 485 ntBASIC19.57■□□□□ 0.72
SLC1A3P43003 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A3P43003 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A3P43003 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLC1A3P43003 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC1A3P43003 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SLC1A3P43003 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC1A3P43003 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
SLC1A3P43003 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC1A3P43003 AC091305.1-201ENST00000479476 895 ntBASIC19.56■□□□□ 0.72
SLC1A3P43003 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 AF213884.3-201ENST00000563833 479 ntBASIC19.56■□□□□ 0.72
SLC1A3P43003 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.56■□□□□ 0.72
SLC1A3P43003 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC1A3P43003 AL136967.2-201ENST00000623968 743 ntBASIC19.56■□□□□ 0.72
SLC1A3P43003 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC1A3P43003 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC1A3P43003 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A3P43003 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A3P43003 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A3P43003 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A3P43003 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLC1A3P43003 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A3P43003 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC1A3P43003 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC1A3P43003 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC1A3P43003 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A3P43003 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A3P43003 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SLC1A3P43003 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A3P43003 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A3P43003 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A3P43003 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A3P43003 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A3P43003 SUDS3P1-201ENST00000505831 966 ntBASIC19.54■□□□□ 0.72
SLC1A3P43003 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.54■□□□□ 0.72
SLC1A3P43003 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
SLC1A3P43003 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A3P43003 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A3P43003 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.54■□□□□ 0.72
SLC1A3P43003 SLC25A24-204ENST00000569674 2357 ntBASIC19.54■□□□□ 0.72
SLC1A3P43003 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A3P43003 TSPY26P-201ENST00000476365 1326 ntBASIC19.53■□□□□ 0.72
SLC1A3P43003 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A3P43003 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SLC1A3P43003 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SLC1A3P43003 AC005229.4-201ENST00000610085 2198 ntBASIC19.53■□□□□ 0.72
SLC1A3P43003 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A3P43003 AP004607.7-201ENST00000527152 1677 ntBASIC19.53■□□□□ 0.72
SLC1A3P43003 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A3P43003 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC1A3P43003 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC1A3P43003 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms