Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.2■□□□□ 0.82
KRT20P35900 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT20P35900 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT20P35900 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT20P35900 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT20P35900 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT20P35900 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
KRT20P35900 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
KRT20P35900 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT20P35900 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT20P35900 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT20P35900 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT20P35900 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
KRT20P35900 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT20P35900 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT20P35900 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KRT20P35900 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT20P35900 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT20P35900 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KRT20P35900 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT20P35900 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KRT20P35900 AC142381.2-201ENST00000566120 298 ntBASIC20.18■□□□□ 0.82
KRT20P35900 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT20P35900 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT20P35900 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KRT20P35900 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT20P35900 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT20P35900 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KRT20P35900 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT20P35900 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KRT20P35900 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT20P35900 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT20P35900 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KRT20P35900 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT20P35900 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT20P35900 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KRT20P35900 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT20P35900 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KRT20P35900 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT20P35900 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT20P35900 AC099791.1-201ENST00000416440 715 ntBASIC20.17■□□□□ 0.82
KRT20P35900 AP001330.3-201ENST00000520123 633 ntBASIC20.17■□□□□ 0.82
KRT20P35900 AP005435.1-201ENST00000529293 1178 ntBASIC20.17■□□□□ 0.82
KRT20P35900 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.17■□□□□ 0.82
KRT20P35900 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT20P35900 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT20P35900 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT20P35900 AF213884.3-201ENST00000563833 479 ntBASIC20.17■□□□□ 0.82
KRT20P35900 AL031602.1-201ENST00000633169 911 ntBASIC20.17■□□□□ 0.82
KRT20P35900 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT20P35900 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT20P35900 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT20P35900 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 AC087742.1-201ENST00000575880 1738 ntBASIC20.16■□□□□ 0.82
KRT20P35900 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 FAM99A-202ENST00000538190 1989 ntBASIC20.16■□□□□ 0.82
KRT20P35900 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT20P35900 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.16■□□□□ 0.82
KRT20P35900 AC091305.1-201ENST00000479476 895 ntBASIC20.16■□□□□ 0.82
KRT20P35900 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT20P35900 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KRT20P35900 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT20P35900 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT20P35900 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT20P35900 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT20P35900 AC005837.3-201ENST00000612163 286 ntBASIC20.15■□□□□ 0.82
KRT20P35900 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT20P35900 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT20P35900 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KRT20P35900 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT20P35900 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
KRT20P35900 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
KRT20P35900 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT20P35900 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT20P35900 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRT20P35900 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.14■□□□□ 0.82
KRT20P35900 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.14■□□□□ 0.82
KRT20P35900 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
KRT20P35900 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRT20P35900 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms