Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC1P29353 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC1P29353 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC1P29353 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHC1P29353 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC1P29353 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC1P29353 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC1P29353 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.5■□□□□ 0.71
SHC1P29353 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.5■□□□□ 0.71
SHC1P29353 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC1P29353 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC1P29353 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.5■□□□□ 0.71
SHC1P29353 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SHC1P29353 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.5■□□□□ 0.71
SHC1P29353 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SHC1P29353 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC1P29353 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.5■□□□□ 0.71
SHC1P29353 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.5■□□□□ 0.71
SHC1P29353 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC1P29353 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.5■□□□□ 0.71
SHC1P29353 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.5■□□□□ 0.71
SHC1P29353 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.5■□□□□ 0.71
SHC1P29353 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC1P29353 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SHC1P29353 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SHC1P29353 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.49■□□□□ 0.71
SHC1P29353 AC012414.1-201ENST00000556676 535 ntBASIC19.49■□□□□ 0.71
SHC1P29353 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SHC1P29353 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SHC1P29353 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.49■□□□□ 0.71
SHC1P29353 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC1P29353 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHC1P29353 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC1P29353 AC026310.3-201ENST00000625186 2373 ntBASIC19.48■□□□□ 0.71
SHC1P29353 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.48■□□□□ 0.71
SHC1P29353 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC1P29353 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.48■□□□□ 0.71
SHC1P29353 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SHC1P29353 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.48■□□□□ 0.71
SHC1P29353 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.48■□□□□ 0.71
SHC1P29353 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.48■□□□□ 0.71
SHC1P29353 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC1P29353 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHC1P29353 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC1P29353 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHC1P29353 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.48■□□□□ 0.71
SHC1P29353 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SHC1P29353 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
SHC1P29353 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.47■□□□□ 0.71
SHC1P29353 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 OR7E47P-201ENST00000546390 1422 ntBASIC19.47■□□□□ 0.71
SHC1P29353 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.47■□□□□ 0.71
SHC1P29353 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SHC1P29353 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.47■□□□□ 0.71
SHC1P29353 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.47■□□□□ 0.71
SHC1P29353 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHC1P29353 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.46■□□□□ 0.71
SHC1P29353 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.46■□□□□ 0.71
SHC1P29353 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.46■□□□□ 0.71
SHC1P29353 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.46■□□□□ 0.71
SHC1P29353 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.46■□□□□ 0.71
SHC1P29353 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.46■□□□□ 0.71
SHC1P29353 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.46■□□□□ 0.71
SHC1P29353 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.46■□□□□ 0.71
SHC1P29353 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHC1P29353 SLC25A24-204ENST00000569674 2357 ntBASIC19.46■□□□□ 0.71
SHC1P29353 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SHC1P29353 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHC1P29353 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHC1P29353 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.45■□□□□ 0.7
SHC1P29353 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHC1P29353 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHC1P29353 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHC1P29353 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHC1P29353 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.45■□□□□ 0.7
SHC1P29353 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms