Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP24386 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP24386 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP24386 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP24386 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP24386 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP24386 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP24386 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP24386 AC068587.7-201ENST00000641602 218 ntBASIC19.88■□□□□ 0.77
CHMP24386 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP24386 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP24386 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHMP24386 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP24386 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP24386 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP24386 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.87■□□□□ 0.77
CHMP24386 IGHV3-19-201ENST00000521488 291 ntBASIC19.87■□□□□ 0.77
CHMP24386 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP24386 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHMP24386 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHMP24386 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP24386 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP24386 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHMP24386 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP24386 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP24386 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP24386 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHMP24386 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMP24386 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP24386 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHMP24386 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP24386 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHMP24386 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP24386 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHMP24386 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 IRS3P-201ENST00000223076 1006 ntBASIC19.85■□□□□ 0.77
CHMP24386 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP24386 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 AL121603.2-201ENST00000557373 2117 ntBASIC19.85■□□□□ 0.77
CHMP24386 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CHMP24386 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP24386 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CHMP24386 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP24386 TSPY26P-201ENST00000476365 1326 ntBASIC19.84■□□□□ 0.77
CHMP24386 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHMP24386 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP24386 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP24386 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.84■□□□□ 0.77
CHMP24386 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP24386 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CHMP24386 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP24386 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP24386 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CHMP24386 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHMP24386 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP24386 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP24386 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP24386 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP24386 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP24386 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP24386 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP24386 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CHMP24386 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP24386 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms