Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RPS4Y1P22090 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.61■□□□□ 0.73
RPS4Y1P22090 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.61■□□□□ 0.73
RPS4Y1P22090 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RPS4Y1P22090 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.61■□□□□ 0.73
RPS4Y1P22090 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RPS4Y1P22090 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y1P22090 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y1P22090 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y1P22090 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 AC091305.1-201ENST00000479476 895 ntBASIC19.6■□□□□ 0.73
RPS4Y1P22090 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y1P22090 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y1P22090 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS4Y1P22090 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.59■□□□□ 0.73
RPS4Y1P22090 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 AL136967.2-201ENST00000623968 743 ntBASIC19.59■□□□□ 0.73
RPS4Y1P22090 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y1P22090 FEM1AP4-201ENST00000443167 1987 ntBASIC19.59■□□□□ 0.73
RPS4Y1P22090 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4Y1P22090 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
RPS4Y1P22090 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4Y1P22090 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
RPS4Y1P22090 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4Y1P22090 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4Y1P22090 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4Y1P22090 MIR572-201ENST00000384983 95 ntBASIC19.58■□□□□ 0.72
RPS4Y1P22090 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.58■□□□□ 0.72
RPS4Y1P22090 SUDS3P1-201ENST00000505831 966 ntBASIC19.58■□□□□ 0.72
RPS4Y1P22090 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS4Y1P22090 AC105233.4-201ENST00000642045 216 ntBASIC19.58■□□□□ 0.72
RPS4Y1P22090 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4Y1P22090 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4Y1P22090 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RPS4Y1P22090 AC009237.3-201ENST00000393279 1427 ntBASIC19.58■□□□□ 0.72
RPS4Y1P22090 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RPS4Y1P22090 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RPS4Y1P22090 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.57■□□□□ 0.72
RPS4Y1P22090 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4Y1P22090 AC055733.4-201ENST00000638462 1354 ntBASIC19.57■□□□□ 0.72
RPS4Y1P22090 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y1P22090 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y1P22090 AL139246.5-201ENST00000606645 996 ntBASIC19.56■□□□□ 0.72
RPS4Y1P22090 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y1P22090 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y1P22090 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4Y1P22090 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
RPS4Y1P22090 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y1P22090 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y1P22090 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms