Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.99■□□□□ 0.95
SDHBP21912 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.99■□□□□ 0.95
SDHBP21912 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SDHBP21912 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.99■□□□□ 0.95
SDHBP21912 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SDHBP21912 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.99■□□□□ 0.95
SDHBP21912 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.99■□□□□ 0.95
SDHBP21912 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.99■□□□□ 0.95
SDHBP21912 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDHBP21912 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDHBP21912 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.98■□□□□ 0.95
SDHBP21912 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.98■□□□□ 0.95
SDHBP21912 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.98■□□□□ 0.95
SDHBP21912 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.98■□□□□ 0.95
SDHBP21912 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.98■□□□□ 0.95
SDHBP21912 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDHBP21912 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SDHBP21912 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SDHBP21912 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDHBP21912 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDHBP21912 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SDHBP21912 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SDHBP21912 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SDHBP21912 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDHBP21912 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.97■□□□□ 0.95
SDHBP21912 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SDHBP21912 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SDHBP21912 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.97■□□□□ 0.95
SDHBP21912 SNORA78-201ENST00000459373 127 ntBASIC20.97■□□□□ 0.95
SDHBP21912 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.97■□□□□ 0.95
SDHBP21912 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SDHBP21912 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.97■□□□□ 0.95
SDHBP21912 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SDHBP21912 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.97■□□□□ 0.95
SDHBP21912 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.97■□□□□ 0.95
SDHBP21912 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDHBP21912 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDHBP21912 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDHBP21912 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SDHBP21912 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SDHBP21912 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SDHBP21912 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SDHBP21912 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SDHBP21912 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.96■□□□□ 0.95
SDHBP21912 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.96■□□□□ 0.95
SDHBP21912 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.96■□□□□ 0.95
SDHBP21912 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SDHBP21912 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.96■□□□□ 0.95
SDHBP21912 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.96■□□□□ 0.95
SDHBP21912 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.96■□□□□ 0.95
SDHBP21912 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SDHBP21912 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDHBP21912 RPPH1-201ENST00000516869 333 ntBASIC20.95■□□□□ 0.94
SDHBP21912 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.95■□□□□ 0.94
SDHBP21912 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.95■□□□□ 0.94
SDHBP21912 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SDHBP21912 KRT17P2-201ENST00000300992 1314 ntBASIC20.95■□□□□ 0.94
SDHBP21912 HLA-L-211ENST00000482052 1765 ntBASIC20.95■□□□□ 0.94
SDHBP21912 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.94■□□□□ 0.94
SDHBP21912 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.94■□□□□ 0.94
SDHBP21912 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.94■□□□□ 0.94
SDHBP21912 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.94■□□□□ 0.94
SDHBP21912 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.94■□□□□ 0.94
SDHBP21912 BX088651.1-201ENST00000540551 451 ntBASIC20.94■□□□□ 0.94
SDHBP21912 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.94■□□□□ 0.94
SDHBP21912 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.94■□□□□ 0.94
SDHBP21912 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
SDHBP21912 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHBP21912 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SDHBP21912 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHBP21912 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHBP21912 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHBP21912 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHBP21912 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHBP21912 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SDHBP21912 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHBP21912 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.93■□□□□ 0.94
SDHBP21912 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.93■□□□□ 0.94
SDHBP21912 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms