Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB3BP20337 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 AC137630.3-201ENST00000607245 391 ntBASIC18.65■□□□□ 0.58
RAB3BP20337 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB3BP20337 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
RAB3BP20337 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB3BP20337 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.64■□□□□ 0.57
RAB3BP20337 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB3BP20337 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB3BP20337 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3BP20337 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB3BP20337 AC009102.2-201ENST00000606772 1639 ntBASIC18.63■□□□□ 0.57
RAB3BP20337 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB3BP20337 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3BP20337 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB3BP20337 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RAB3BP20337 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3BP20337 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB3BP20337 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RAB3BP20337 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3BP20337 AC079089.2-201ENST00000531211 1277 ntBASIC18.63■□□□□ 0.57
RAB3BP20337 NTF6A-201ENST00000591175 560 ntBASIC18.63■□□□□ 0.57
RAB3BP20337 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3BP20337 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RAB3BP20337 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3BP20337 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB3BP20337 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
RAB3BP20337 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RAB3BP20337 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB3BP20337 ATP5G2P3-201ENST00000429083 425 ntBASIC18.62■□□□□ 0.57
RAB3BP20337 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3BP20337 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3BP20337 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3BP20337 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3BP20337 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3BP20337 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
RAB3BP20337 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RAB3BP20337 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAB3BP20337 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB3BP20337 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3BP20337 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3BP20337 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
RAB3BP20337 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RAB3BP20337 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3BP20337 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
RAB3BP20337 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAB3BP20337 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB3BP20337 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 AC004987.1-201ENST00000428627 508 ntBASIC18.61■□□□□ 0.57
RAB3BP20337 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB3BP20337 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB3BP20337 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RAB3BP20337 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB3BP20337 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB3BP20337 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB3BP20337 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RAB3BP20337 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RAB3BP20337 OR7E47P-201ENST00000546390 1422 ntBASIC18.6■□□□□ 0.57
RAB3BP20337 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB3BP20337 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB3BP20337 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB3BP20337 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms