Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1BP20333 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 AC104564.3-201ENST00000582367 638 ntBASIC19.79■□□□□ 0.76
TNFRSF1BP20333 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1BP20333 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 SRD5A1P1-201ENST00000442297 786 ntBASIC19.78■□□□□ 0.76
TNFRSF1BP20333 AL512631.2-201ENST00000604634 923 ntBASIC19.78■□□□□ 0.76
TNFRSF1BP20333 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TNFRSF1BP20333 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1BP20333 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1BP20333 AC010141.3-201ENST00000456659 717 ntBASIC19.77■□□□□ 0.76
TNFRSF1BP20333 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFRSF1BP20333 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1BP20333 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1BP20333 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1BP20333 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1BP20333 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TNFRSF1BP20333 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 AC068587.7-201ENST00000641602 218 ntBASIC19.76■□□□□ 0.75
TNFRSF1BP20333 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1BP20333 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1BP20333 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.74■□□□□ 0.75
TNFRSF1BP20333 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 AC087239.1-201ENST00000622671 572 ntBASIC19.74■□□□□ 0.75
TNFRSF1BP20333 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TNFRSF1BP20333 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms