Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 AC026471.1-201ENST00000564629 3026 ntBASIC20.53■□□□□ 0.88
LINGO3P0C6S8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 AL117332.1-201ENST00000622628 974 ntBASIC20.53■□□□□ 0.88
LINGO3P0C6S8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINGO3P0C6S8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 MIR3621-201ENST00000580529 85 ntBASIC20.52■□□□□ 0.88
LINGO3P0C6S8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINGO3P0C6S8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINGO3P0C6S8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINGO3P0C6S8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LINGO3P0C6S8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINGO3P0C6S8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 AL356740.2-201ENST00000601559 647 ntBASIC20.49■□□□□ 0.87
LINGO3P0C6S8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINGO3P0C6S8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINGO3P0C6S8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LINGO3P0C6S8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINGO3P0C6S8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms