Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP2P08253 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
MMP2P08253 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.58■■□□□ 1.05
MMP2P08253 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.58■■□□□ 1.04
MMP2P08253 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MMP2P08253 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MMP2P08253 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
MMP2P08253 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP2P08253 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP2P08253 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MMP2P08253 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP2P08253 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP2P08253 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP2P08253 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MMP2P08253 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.57■■□□□ 1.04
MMP2P08253 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.57■■□□□ 1.04
MMP2P08253 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.57■■□□□ 1.04
MMP2P08253 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP2P08253 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.56■■□□□ 1.04
MMP2P08253 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP2P08253 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP2P08253 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.56■■□□□ 1.04
MMP2P08253 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP2P08253 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP2P08253 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
MMP2P08253 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.56■■□□□ 1.04
MMP2P08253 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP2P08253 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP2P08253 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
MMP2P08253 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP2P08253 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
MMP2P08253 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP2P08253 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP2P08253 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.55■■□□□ 1.04
MMP2P08253 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.55■■□□□ 1.04
MMP2P08253 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.55■■□□□ 1.04
MMP2P08253 AC123595.1-201ENST00000440769 1046 ntBASIC21.55■■□□□ 1.04
MMP2P08253 YBX1P1-201ENST00000445822 960 ntBASIC21.55■■□□□ 1.04
MMP2P08253 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.55■■□□□ 1.04
MMP2P08253 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.55■■□□□ 1.04
MMP2P08253 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP2P08253 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.55■■□□□ 1.04
MMP2P08253 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP2P08253 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP2P08253 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP2P08253 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP2P08253 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP2P08253 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MMP2P08253 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP2P08253 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MMP2P08253 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP2P08253 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP2P08253 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MMP2P08253 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP2P08253 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP2P08253 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP2P08253 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP2P08253 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.53■■□□□ 1.04
MMP2P08253 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
MMP2P08253 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP2P08253 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP2P08253 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MMP2P08253 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.53■■□□□ 1.04
MMP2P08253 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP2P08253 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MMP2P08253 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MMP2P08253 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP2P08253 AC244015.2-201ENST00000616358 1861 ntBASIC21.53■■□□□ 1.04
MMP2P08253 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP2P08253 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP2P08253 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MMP2P08253 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MMP2P08253 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP2P08253 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 LINC02228-203ENST00000641970 1355 ntBASIC21.52■■□□□ 1.04
MMP2P08253 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP2P08253 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.52■■□□□ 1.04
MMP2P08253 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.52■■□□□ 1.04
MMP2P08253 TERF1P2-201ENST00000583350 1212 ntBASIC21.52■■□□□ 1.04
MMP2P08253 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.52■■□□□ 1.04
MMP2P08253 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP2P08253 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP2P08253 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP2P08253 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MMP2P08253 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms