Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
SOD1P00441 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.14■□□□□ 0.97
SOD1P00441 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SOD1P00441 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.14■□□□□ 0.97
SOD1P00441 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.14■□□□□ 0.97
SOD1P00441 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOD1P00441 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOD1P00441 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SOD1P00441 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.13■□□□□ 0.97
SOD1P00441 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.13■□□□□ 0.97
SOD1P00441 KRT19P1-201ENST00000405746 1186 ntBASIC21.13■□□□□ 0.97
SOD1P00441 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.13■□□□□ 0.97
SOD1P00441 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 FAM99A-202ENST00000538190 1989 ntBASIC21.13■□□□□ 0.97
SOD1P00441 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.13■□□□□ 0.97
SOD1P00441 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SOD1P00441 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOD1P00441 ECEL1P1-201ENST00000373592 1742 ntBASIC21.12■□□□□ 0.97
SOD1P00441 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SOD1P00441 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOD1P00441 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOD1P00441 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOD1P00441 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOD1P00441 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOD1P00441 AC006015.1-201ENST00000429970 570 ntBASIC21.12■□□□□ 0.97
SOD1P00441 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.12■□□□□ 0.97
SOD1P00441 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.12■□□□□ 0.97
SOD1P00441 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.12■□□□□ 0.97
SOD1P00441 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOD1P00441 AC003102.1-202ENST00000563394 1796 ntBASIC21.12■□□□□ 0.97
SOD1P00441 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SOD1P00441 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOD1P00441 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOD1P00441 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
SOD1P00441 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOD1P00441 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SOD1P00441 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.11■□□□□ 0.97
SOD1P00441 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.11■□□□□ 0.97
SOD1P00441 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.11■□□□□ 0.97
SOD1P00441 EEF1DP3-203ENST00000566025 782 ntBASIC21.11■□□□□ 0.97
SOD1P00441 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOD1P00441 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOD1P00441 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SOD1P00441 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.1■□□□□ 0.97
SOD1P00441 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SOD1P00441 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.1■□□□□ 0.97
SOD1P00441 AL137784.2-201ENST00000607332 1000 ntBASIC21.1■□□□□ 0.97
SOD1P00441 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SOD1P00441 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.1■□□□□ 0.97
SOD1P00441 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
SOD1P00441 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOD1P00441 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.1■□□□□ 0.97
SOD1P00441 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOD1P00441 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOD1P00441 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOD1P00441 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOD1P00441 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.09■□□□□ 0.97
SOD1P00441 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.09■□□□□ 0.97
SOD1P00441 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.09■□□□□ 0.97
SOD1P00441 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.09■□□□□ 0.97
SOD1P00441 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.09■□□□□ 0.97
SOD1P00441 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.09■□□□□ 0.97
SOD1P00441 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOD1P00441 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SOD1P00441 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SOD1P00441 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
SOD1P00441 AC137761.2-201ENST00000561729 223 ntBASIC21.08■□□□□ 0.97
SOD1P00441 AC145350.3-201ENST00000569033 163 ntBASIC21.08■□□□□ 0.97
SOD1P00441 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOD1P00441 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SOD1P00441 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SOD1P00441 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SOD1P00441 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms