Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPTM1O96005 AC087289.5-201ENST00000586076 3175 ntBASIC20.03■□□□□ 0.8
CLPTM1O96005 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1O96005 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1O96005 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1O96005 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1O96005 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1O96005 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.03■□□□□ 0.8
CLPTM1O96005 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPTM1O96005 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1O96005 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPTM1O96005 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1O96005 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1O96005 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.8
CLPTM1O96005 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.02■□□□□ 0.8
CLPTM1O96005 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLPTM1O96005 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1O96005 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1O96005 AC239859.2-201ENST00000444165 318 ntBASIC20.02■□□□□ 0.8
CLPTM1O96005 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1O96005 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLPTM1O96005 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLPTM1O96005 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLPTM1O96005 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1O96005 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.02■□□□□ 0.8
CLPTM1O96005 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1O96005 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLPTM1O96005 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CLPTM1O96005 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CLPTM1O96005 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.01■□□□□ 0.79
CLPTM1O96005 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CLPTM1O96005 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.01■□□□□ 0.79
CLPTM1O96005 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1O96005 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CLPTM1O96005 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20■□□□□ 0.79
CLPTM1O96005 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20■□□□□ 0.79
CLPTM1O96005 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20■□□□□ 0.79
CLPTM1O96005 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLPTM1O96005 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLPTM1O96005 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.99■□□□□ 0.79
CLPTM1O96005 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.99■□□□□ 0.79
CLPTM1O96005 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPTM1O96005 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPTM1O96005 BX664725.1-201ENST00000438252 379 ntBASIC19.99■□□□□ 0.79
CLPTM1O96005 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLPTM1O96005 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CLPTM1O96005 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.99■□□□□ 0.79
CLPTM1O96005 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPTM1O96005 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLPTM1O96005 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLPTM1O96005 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.99■□□□□ 0.79
CLPTM1O96005 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPTM1O96005 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLPTM1O96005 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLPTM1O96005 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLPTM1O96005 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLPTM1O96005 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CLPTM1O96005 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.98■□□□□ 0.79
CLPTM1O96005 AC137630.3-201ENST00000607245 391 ntBASIC19.98■□□□□ 0.79
CLPTM1O96005 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLPTM1O96005 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.98■□□□□ 0.79
CLPTM1O96005 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.98■□□□□ 0.79
CLPTM1O96005 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPTM1O96005 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
CLPTM1O96005 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.97■□□□□ 0.79
CLPTM1O96005 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.97■□□□□ 0.79
CLPTM1O96005 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.97■□□□□ 0.79
CLPTM1O96005 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms