Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AL354811.1-201ENST00000610286 706 ntBASIC21.81■■□□□ 1.08
TOP3BO95985 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.81■■□□□ 1.08
TOP3BO95985 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP3BO95985 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TOP3BO95985 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TOP3BO95985 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.8■■□□□ 1.08
TOP3BO95985 AC010542.4-201ENST00000563151 1910 ntBASIC21.8■■□□□ 1.08
TOP3BO95985 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 AC026310.3-201ENST00000625186 2373 ntBASIC21.8■■□□□ 1.08
TOP3BO95985 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TOP3BO95985 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 IGHV3-19-201ENST00000521488 291 ntBASIC21.8■■□□□ 1.08
TOP3BO95985 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.8■■□□□ 1.08
TOP3BO95985 KRT18P61-201ENST00000585825 1298 ntBASIC21.8■■□□□ 1.08
TOP3BO95985 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.8■■□□□ 1.08
TOP3BO95985 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.8■■□□□ 1.08
TOP3BO95985 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TOP3BO95985 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TOP3BO95985 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.8■■□□□ 1.08
TOP3BO95985 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP3BO95985 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP3BO95985 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP3BO95985 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP3BO95985 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TOP3BO95985 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TOP3BO95985 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP3BO95985 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TOP3BO95985 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TOP3BO95985 AC006015.1-201ENST00000429970 570 ntBASIC21.79■■□□□ 1.08
TOP3BO95985 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.79■■□□□ 1.08
TOP3BO95985 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.79■■□□□ 1.08
TOP3BO95985 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP3BO95985 FAM99A-202ENST00000538190 1989 ntBASIC21.79■■□□□ 1.08
TOP3BO95985 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 LINC02228-203ENST00000641970 1355 ntBASIC21.78■■□□□ 1.08
TOP3BO95985 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP3BO95985 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.78■■□□□ 1.08
TOP3BO95985 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP3BO95985 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.78■■□□□ 1.08
TOP3BO95985 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.78■■□□□ 1.08
TOP3BO95985 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP3BO95985 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP3BO95985 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TOP3BO95985 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.78■■□□□ 1.08
TOP3BO95985 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP3BO95985 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TOP3BO95985 AC004687.1-201ENST00000579003 1625 ntBASIC21.77■■□□□ 1.08
TOP3BO95985 FP325331.1-202ENST00000623531 1380 ntBASIC21.77■■□□□ 1.08
TOP3BO95985 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.77■■□□□ 1.08
TOP3BO95985 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
TOP3BO95985 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP3BO95985 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.77■■□□□ 1.08
TOP3BO95985 AL109923.1-201ENST00000618799 583 ntBASIC21.77■■□□□ 1.08
TOP3BO95985 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TOP3BO95985 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP3BO95985 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP3BO95985 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP3BO95985 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TOP3BO95985 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TOP3BO95985 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
TOP3BO95985 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TOP3BO95985 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP3BO95985 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TOP3BO95985 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.76■■□□□ 1.07
TOP3BO95985 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TOP3BO95985 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP3BO95985 DUX4L4-201ENST00000566884 1269 ntBASIC21.76■■□□□ 1.07
TOP3BO95985 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
TOP3BO95985 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP3BO95985 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP3BO95985 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP3BO95985 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP3BO95985 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TOP3BO95985 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.75■■□□□ 1.07
TOP3BO95985 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP3BO95985 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TOP3BO95985 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP3BO95985 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP3BO95985 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP3BO95985 AC026185.1-201ENST00000445748 174 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms