Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SLC7A5P1-201ENST00000568957 537 ntBASIC17.83■□□□□ 0.45
ABCA1O95477 AC133041.1-202ENST00000642053 222 ntBASIC17.83■□□□□ 0.45
ABCA1O95477 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ABCA1O95477 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ABCA1O95477 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.83■□□□□ 0.45
ABCA1O95477 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ABCA1O95477 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.83■□□□□ 0.44
ABCA1O95477 AC055733.4-201ENST00000638462 1354 ntBASIC17.83■□□□□ 0.44
ABCA1O95477 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.83■□□□□ 0.44
ABCA1O95477 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
ABCA1O95477 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.83■□□□□ 0.44
ABCA1O95477 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.83■□□□□ 0.44
ABCA1O95477 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.83■□□□□ 0.44
ABCA1O95477 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ABCA1O95477 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ABCA1O95477 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.82■□□□□ 0.44
ABCA1O95477 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.82■□□□□ 0.44
ABCA1O95477 AP001160.3-201ENST00000601484 763 ntBASIC17.82■□□□□ 0.44
ABCA1O95477 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ABCA1O95477 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ABCA1O95477 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ABCA1O95477 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ABCA1O95477 AC105036.2-201ENST00000569468 176 ntBASIC17.82■□□□□ 0.44
ABCA1O95477 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ABCA1O95477 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.82■□□□□ 0.44
ABCA1O95477 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.82■□□□□ 0.44
ABCA1O95477 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ABCA1O95477 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ABCA1O95477 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.81■□□□□ 0.44
ABCA1O95477 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ABCA1O95477 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ABCA1O95477 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ABCA1O95477 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.81■□□□□ 0.44
ABCA1O95477 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ABCA1O95477 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.8■□□□□ 0.44
ABCA1O95477 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ABCA1O95477 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.8■□□□□ 0.44
ABCA1O95477 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ABCA1O95477 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.8■□□□□ 0.44
ABCA1O95477 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ABCA1O95477 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.8■□□□□ 0.44
ABCA1O95477 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.8■□□□□ 0.44
ABCA1O95477 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ABCA1O95477 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ABCA1O95477 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.8■□□□□ 0.44
ABCA1O95477 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ABCA1O95477 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.8■□□□□ 0.44
ABCA1O95477 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
ABCA1O95477 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ABCA1O95477 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ABCA1O95477 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.79■□□□□ 0.44
ABCA1O95477 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.79■□□□□ 0.44
ABCA1O95477 OXCT2P1-201ENST00000447263 1535 ntBASIC17.79■□□□□ 0.44
ABCA1O95477 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.79■□□□□ 0.44
ABCA1O95477 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.79■□□□□ 0.44
ABCA1O95477 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ABCA1O95477 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ABCA1O95477 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.79■□□□□ 0.44
ABCA1O95477 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.79■□□□□ 0.44
ABCA1O95477 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ABCA1O95477 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 MKRN4P-201ENST00000444706 1521 ntBASIC17.79■□□□□ 0.44
ABCA1O95477 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ABCA1O95477 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCA1O95477 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCA1O95477 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCA1O95477 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ABCA1O95477 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ABCA1O95477 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCA1O95477 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.78■□□□□ 0.44
ABCA1O95477 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.78■□□□□ 0.44
ABCA1O95477 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCA1O95477 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ABCA1O95477 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCA1O95477 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ABCA1O95477 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.78■□□□□ 0.44
ABCA1O95477 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.78■□□□□ 0.44
ABCA1O95477 AC010536.3-201ENST00000620306 533 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms