Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SNRNP200O75643 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNRNP200O75643 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.52■□□□□ 0.87
SNRNP200O75643 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.51■□□□□ 0.87
SNRNP200O75643 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.51■□□□□ 0.87
SNRNP200O75643 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRNP200O75643 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.51■□□□□ 0.87
SNRNP200O75643 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.51■□□□□ 0.87
SNRNP200O75643 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.51■□□□□ 0.87
SNRNP200O75643 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.51■□□□□ 0.87
SNRNP200O75643 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRNP200O75643 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRNP200O75643 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRNP200O75643 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRNP200O75643 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SNRNP200O75643 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNRNP200O75643 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRNP200O75643 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.5■□□□□ 0.87
SNRNP200O75643 AC137761.2-201ENST00000561729 223 ntBASIC20.5■□□□□ 0.87
SNRNP200O75643 AC145350.3-201ENST00000569033 163 ntBASIC20.5■□□□□ 0.87
SNRNP200O75643 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.5■□□□□ 0.87
SNRNP200O75643 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SNRNP200O75643 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SNRNP200O75643 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRNP200O75643 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.5■□□□□ 0.87
SNRNP200O75643 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRNP200O75643 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNRNP200O75643 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
SNRNP200O75643 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.5■□□□□ 0.87
SNRNP200O75643 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRNP200O75643 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.49■□□□□ 0.87
SNRNP200O75643 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SNRNP200O75643 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRNP200O75643 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.49■□□□□ 0.87
SNRNP200O75643 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.49■□□□□ 0.87
SNRNP200O75643 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRNP200O75643 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRNP200O75643 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRNP200O75643 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRNP200O75643 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.49■□□□□ 0.87
SNRNP200O75643 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.49■□□□□ 0.87
SNRNP200O75643 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.49■□□□□ 0.87
SNRNP200O75643 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.49■□□□□ 0.87
SNRNP200O75643 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRNP200O75643 AC003102.1-202ENST00000563394 1796 ntBASIC20.49■□□□□ 0.87
SNRNP200O75643 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRNP200O75643 EEF1DP3-203ENST00000566025 782 ntBASIC20.48■□□□□ 0.87
SNRNP200O75643 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.48■□□□□ 0.87
SNRNP200O75643 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.48■□□□□ 0.87
SNRNP200O75643 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNRNP200O75643 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.48■□□□□ 0.87
SNRNP200O75643 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.48■□□□□ 0.87
SNRNP200O75643 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.48■□□□□ 0.87
SNRNP200O75643 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNRNP200O75643 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SNRNP200O75643 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.48■□□□□ 0.87
SNRNP200O75643 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRNP200O75643 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNRNP200O75643 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRNP200O75643 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRNP200O75643 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRNP200O75643 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRNP200O75643 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SNRNP200O75643 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRNP200O75643 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNRNP200O75643 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRNP200O75643 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRNP200O75643 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SNRNP200O75643 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNRNP200O75643 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SNRNP200O75643 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNRNP200O75643 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNRNP200O75643 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRNP200O75643 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.47■□□□□ 0.87
SNRNP200O75643 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.47■□□□□ 0.87
SNRNP200O75643 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRNP200O75643 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRNP200O75643 ECEL1P1-201ENST00000373592 1742 ntBASIC20.47■□□□□ 0.87
SNRNP200O75643 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRNP200O75643 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.46■□□□□ 0.87
SNRNP200O75643 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP200O75643 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.46■□□□□ 0.87
SNRNP200O75643 C11orf96-202ENST00000528572 1834 ntBASIC20.46■□□□□ 0.87
SNRNP200O75643 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP200O75643 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP200O75643 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.46■□□□□ 0.87
SNRNP200O75643 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP200O75643 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.46■□□□□ 0.87
SNRNP200O75643 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP200O75643 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms