Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 ZNF649-203ENST00000596690 564 ntTSL 410.64□□□□□ -0.711e-7■■■■■ 172.3
SF3B1O75533 FAM129A-204ENST00000487074 3118 ntTSL 510.64□□□□□ -0.712e-6■■■■■ 172.3
SF3B1O75533 TOR1AIP1-206ENST00000527391 593 ntTSL 510.62□□□□□ -0.711e-7■■■■■ 172.3
SF3B1O75533 KCNJ15-215ENST00000548700 304 ntTSL 310.62□□□□□ -0.711e-7■■■■■ 172.3
SF3B1O75533 PARP14-201ENST00000460683 8437 ntTSL 510.61□□□□□ -0.711e-7■■■■■ 172.3
SF3B1O75533 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC10.61□□□□□ -0.716e-8■■■■■ 172.3
SF3B1O75533 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.711e-7■■■■■ 172.3
SF3B1O75533 FNBP1L-202ENST00000271234 4212 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.721e-7■■■■■ 172.3
SF3B1O75533 ACAD10-203ENST00000455480 4071 ntTSL 1 (best) BASIC10.56□□□□□ -0.721e-7■■■■■ 172.3
SF3B1O75533 BBS1-201ENST00000318312 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.721e-7■■■■■ 172.3
SF3B1O75533 SLC25A14-201ENST00000218197 1616 ntTSL 1 (best) BASIC10.55□□□□□ -0.721e-7■■■■■ 172.3
SF3B1O75533 ZNF215-201ENST00000278319 3448 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.721e-7■■■■■ 172.3
SF3B1O75533 AC132807.2-202ENST00000616960 339 ntTSL 5 BASIC10.54□□□□□ -0.721e-7■■■■■ 172.3
SF3B1O75533 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC10.53□□□□□ -0.721e-7■■■■■ 172.3
SF3B1O75533 MND1-201ENST00000240488 968 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.731e-7■■■■■ 172.3
SF3B1O75533 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.734e-21■■■■■ 172.3
SF3B1O75533 DRC3-214ENST00000583171 878 ntTSL 310.48□□□□□ -0.731e-7■■■■■ 172.3
SF3B1O75533 ZNF649-202ENST00000595418 546 ntTSL 510.47□□□□□ -0.731e-7■■■■■ 172.3
SF3B1O75533 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.741e-7■■■■■ 172.3
SF3B1O75533 PLAGL1-214ENST00000626373 333 ntTSL 1 (best)10.42□□□□□ -0.741e-7■■■■■ 172.3
SF3B1O75533 AC132807.2-201ENST00000624232 307 ntTSL 510.42□□□□□ -0.741e-7■■■■■ 172.3
SF3B1O75533 AREL1-216ENST00000557401 3598 ntTSL 510.38□□□□□ -0.752e-6■■■■■ 172.3
SF3B1O75533 ARID1B-221ENST00000636940 5910 ntTSL 510.37□□□□□ -0.751e-7■■■■■ 172.3
SF3B1O75533 CARD8-213ENST00000519940 2056 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.751e-7■■■■■ 172.3
SF3B1O75533 ARFGAP2-210ENST00000526342 474 ntTSL 510.33□□□□□ -0.761e-7■■■■■ 172.3
SF3B1O75533 BBS1-218ENST00000529955 3437 ntTSL 1 (best)10.32□□□□□ -0.761e-7■■■■■ 172.3
SF3B1O75533 ACAD10-201ENST00000313698 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.761e-7■■■■■ 172.3
SF3B1O75533 ST3GAL5-250ENST00000640222 2356 ntTSL 510.25□□□□□ -0.771e-7■■■■■ 172.3
SF3B1O75533 PARG-206ENST00000614063 3473 ntTSL 210.24□□□□□ -0.771e-7■■■■■ 172.3
SF3B1O75533 CARD8-224ENST00000522431 622 ntTSL 2 BASIC10.24□□□□□ -0.771e-7■■■■■ 172.3
SF3B1O75533 SIPA1L1-209ENST00000555066 785 ntTSL 410.23□□□□□ -0.771e-7■■■■■ 172.3
SF3B1O75533 FNBP1L-204ENST00000424449 1518 ntTSL 210.2□□□□□ -0.781e-7■■■■■ 172.3
SF3B1O75533 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.781e-7■■■■■ 172.3
SF3B1O75533 DNAJB14-202ENST00000398991 842 ntTSL 510.18□□□□□ -0.781e-7■■■■■ 172.3
SF3B1O75533 UMPS-202ENST00000460034 2081 ntTSL 1 (best)10.17□□□□□ -0.781e-7■■■■■ 172.3
SF3B1O75533 CHD8-206ENST00000553870 679 ntTSL 510.14□□□□□ -0.791e-7■■■■■ 172.3
SF3B1O75533 SIDT2-203ENST00000431081 3910 ntTSL 1 (best) BASIC10.12□□□□□ -0.791e-7■■■■■ 172.3
SF3B1O75533 METTL14-203ENST00000506780 927 ntTSL 510.1□□□□□ -0.791e-7■■■■■ 172.3
SF3B1O75533 TP53BP1-208ENST00000434561 613 ntTSL 310.1□□□□□ -0.791e-7■■■■■ 172.3
SF3B1O75533 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC10.09□□□□□ -0.792e-14■■■■■ 172.3
SF3B1O75533 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.791e-7■■■■■ 172.3
SF3B1O75533 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.791e-7■■■■■ 172.3
SF3B1O75533 TRMT1L-204ENST00000487028 619 ntTSL 210.08□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 STIL-208ENST00000436811 633 ntTSL 210.08□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 LINC01376-203ENST00000432142 571 ntTSL 410.08□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 SLC25A14-211ENST00000478474 807 ntTSL 510.07□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC10.05□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 PAXIP1-206ENST00000473219 5515 ntTSL 510.03□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC10.03□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 AGBL4-202ENST00000371836 1454 ntTSL 1 (best) BASIC10.02□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81e-7■■■■■ 172.3
SF3B1O75533 ACAD10-220ENST00000549590 2888 ntTSL 5 BASIC10.02□□□□□ -0.811e-7■■■■■ 172.3
SF3B1O75533 TOR1AIP1-210ENST00000531630 579 ntTSL 510□□□□□ -0.811e-7■■■■■ 172.3
SF3B1O75533 SIX4-202ENST00000554079 2003 ntTSL 1 (best)10□□□□□ -0.811e-7■■■■■ 172.3
SF3B1O75533 SENP2-210ENST00000473760 738 ntTSL 29.99□□□□□ -0.811e-7■■■■■ 172.3
SF3B1O75533 ADIPOR1-205ENST00000495562 2109 ntTSL 29.96□□□□□ -0.821e-7■■■■■ 172.3
SF3B1O75533 KLHL3-204ENST00000504208 1566 ntTSL 29.93□□□□□ -0.821e-7■■■■■ 172.3
SF3B1O75533 ZEB1-206ENST00000488625 6026 ntTSL 1 (best)9.9□□□□□ -0.821e-6■■■■■ 172.3
SF3B1O75533 DHFR-206ENST00000513048 994 ntTSL 1 (best)9.88□□□□□ -0.831e-7■■■■■ 172.3
SF3B1O75533 PPP1R32-206ENST00000542951 594 ntTSL 29.88□□□□□ -0.831e-7■■■■■ 172.3
SF3B1O75533 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.831e-7■■■■■ 172.3
SF3B1O75533 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.831e-7■■■■■ 172.3
SF3B1O75533 CCDC59-205ENST00000552377 563 ntTSL 59.87□□□□□ -0.831e-7■■■■■ 172.3
SF3B1O75533 AATF-205ENST00000616392 474 ntTSL 29.86□□□□□ -0.831e-7■■■■■ 172.3
SF3B1O75533 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.831e-7■■■■■ 172.3
SF3B1O75533 ADAT1-206ENST00000566450 501 ntTSL 39.82□□□□□ -0.841e-7■■■■■ 172.3
SF3B1O75533 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC9.8□□□□□ -0.841e-7■■■■■ 172.3
SF3B1O75533 SLC25A12-209ENST00000485880 552 ntTSL 39.8□□□□□ -0.842e-14■■■■■ 172.3
SF3B1O75533 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.841e-7■■■■■ 172.3
SF3B1O75533 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC9.77□□□□□ -0.851e-7■■■■■ 172.3
SF3B1O75533 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.851e-7■■■■■ 172.3
SF3B1O75533 ZNF649-204ENST00000597882 561 ntTSL 49.74□□□□□ -0.851e-7■■■■■ 172.3
SF3B1O75533 CYP4A22-AS1-201ENST00000444042 921 ntTSL 5 BASIC9.72□□□□□ -0.851e-7■■■■■ 172.3
SF3B1O75533 ADAT1-205ENST00000566445 2768 ntTSL 59.71□□□□□ -0.861e-7■■■■■ 172.3
SF3B1O75533 SLC25A26-206ENST00000484768 375 ntTSL 39.69□□□□□ -0.861e-7■■■■■ 172.3
SF3B1O75533 AC068051.1-201ENST00000412896 442 ntTSL 4 BASIC9.67□□□□□ -0.861e-7■■■■■ 172.3
SF3B1O75533 AC068051.1-202ENST00000437883 543 ntTSL 4 BASIC9.67□□□□□ -0.861e-7■■■■■ 172.3
SF3B1O75533 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC9.67□□□□□ -0.861e-7■■■■■ 172.3
SF3B1O75533 TNRC6C-203ENST00000585438 682 ntTSL 59.66□□□□□ -0.861e-7■■■■■ 172.3
SF3B1O75533 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.872e-6■■■■■ 172.3
SF3B1O75533 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.871e-7■■■■■ 172.3
SF3B1O75533 CARD8-218ENST00000521092 555 ntTSL 29.61□□□□□ -0.871e-7■■■■■ 172.3
SF3B1O75533 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC9.6□□□□□ -0.871e-7■■■■■ 172.3
SF3B1O75533 ARID1B-212ENST00000635957 4048 ntAPPRIS ALT2 TSL 59.58□□□□□ -0.881e-7■■■■■ 172.3
SF3B1O75533 AGAP3-212ENST00000473633 3751 ntTSL 1 (best)9.55□□□□□ -0.881e-7■■■■■ 172.3
SF3B1O75533 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.891e-7■■■■■ 172.3
SF3B1O75533 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.891e-7■■■■■ 172.3
SF3B1O75533 RNF157-207ENST00000592271 755 ntTSL 2 BASIC9.44□□□□□ -0.91e-7■■■■■ 172.3
SF3B1O75533 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.94e-21■■■■■ 172.3
SF3B1O75533 ACIN1-215ENST00000555395 514 ntTSL 29.39□□□□□ -0.911e-7■■■■■ 172.3
SF3B1O75533 UEVLD-210ENST00000540666 1830 ntTSL 29.39□□□□□ -0.911e-7■■■■■ 172.3
SF3B1O75533 PRR16-205ENST00000509923 559 ntTSL 39.38□□□□□ -0.912e-6■■■■■ 172.3
SF3B1O75533 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC9.38□□□□□ -0.911e-7■■■■■ 172.3
SF3B1O75533 LRCH3-219ENST00000494069 783 ntTSL 59.36□□□□□ -0.911e-7■■■■■ 172.3
SF3B1O75533 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC9.36□□□□□ -0.911e-7■■■■■ 172.3
SF3B1O75533 ARID1B-214ENST00000636227 6386 ntTSL 59.33□□□□□ -0.921e-7■■■■■ 172.3
SF3B1O75533 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.921e-7■■■■■ 172.3
SF3B1O75533 TOX3-203ENST00000563091 572 ntTSL 49.32□□□□□ -0.921e-7■■■■■ 172.3
SF3B1O75533 PAPSS1-205ENST00000511304 927 ntTSL 39.32□□□□□ -0.921e-7■■■■■ 172.3
SF3B1O75533 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.921e-7■■■■■ 172.3
Retrieved 100 of 46,956 protein–RNA pairs in 1451.8 ms