Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMPCBO75439 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMPCBO75439 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PMPCBO75439 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.67■■□□□ 1.06
PMPCBO75439 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
PMPCBO75439 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.67■■□□□ 1.06
PMPCBO75439 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PMPCBO75439 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.67■■□□□ 1.06
PMPCBO75439 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMPCBO75439 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMPCBO75439 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.67■■□□□ 1.06
PMPCBO75439 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.66■■□□□ 1.06
PMPCBO75439 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMPCBO75439 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
PMPCBO75439 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.66■■□□□ 1.06
PMPCBO75439 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMPCBO75439 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMPCBO75439 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMPCBO75439 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.66■■□□□ 1.06
PMPCBO75439 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PMPCBO75439 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.66■■□□□ 1.06
PMPCBO75439 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PMPCBO75439 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMPCBO75439 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.66■■□□□ 1.06
PMPCBO75439 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMPCBO75439 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMPCBO75439 AC019069.1-201ENST00000610008 1333 ntBASIC21.65■■□□□ 1.06
PMPCBO75439 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMPCBO75439 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMPCBO75439 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PMPCBO75439 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.65■■□□□ 1.06
PMPCBO75439 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.65■■□□□ 1.06
PMPCBO75439 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
PMPCBO75439 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMPCBO75439 BX005040.4-201ENST00000637145 1518 ntBASIC21.65■■□□□ 1.06
PMPCBO75439 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMPCBO75439 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.64■■□□□ 1.06
PMPCBO75439 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PMPCBO75439 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.64■■□□□ 1.06
PMPCBO75439 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PMPCBO75439 IRS3P-201ENST00000223076 1006 ntBASIC21.64■■□□□ 1.05
PMPCBO75439 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PMPCBO75439 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PMPCBO75439 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.64■■□□□ 1.05
PMPCBO75439 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PMPCBO75439 AC012414.1-201ENST00000556676 535 ntBASIC21.64■■□□□ 1.05
PMPCBO75439 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.64■■□□□ 1.05
PMPCBO75439 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.64■■□□□ 1.05
PMPCBO75439 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.64■■□□□ 1.05
PMPCBO75439 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMPCBO75439 AP006587.3-201ENST00000525742 1516 ntBASIC21.64■■□□□ 1.05
PMPCBO75439 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMPCBO75439 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PMPCBO75439 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PMPCBO75439 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.63■■□□□ 1.05
PMPCBO75439 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.63■■□□□ 1.05
PMPCBO75439 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.63■■□□□ 1.05
PMPCBO75439 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.63■■□□□ 1.05
PMPCBO75439 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.63■■□□□ 1.05
PMPCBO75439 MIR6084-201ENST00000622012 110 ntBASIC21.63■■□□□ 1.05
PMPCBO75439 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PMPCBO75439 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PMPCBO75439 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMPCBO75439 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMPCBO75439 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PMPCBO75439 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.62■■□□□ 1.05
PMPCBO75439 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.62■■□□□ 1.05
PMPCBO75439 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.62■■□□□ 1.05
PMPCBO75439 AL354811.1-201ENST00000610286 706 ntBASIC21.62■■□□□ 1.05
PMPCBO75439 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.62■■□□□ 1.05
PMPCBO75439 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMPCBO75439 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMPCBO75439 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMPCBO75439 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.62■■□□□ 1.05
PMPCBO75439 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMPCBO75439 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.61■■□□□ 1.05
PMPCBO75439 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PMPCBO75439 AC009237.3-201ENST00000393279 1427 ntBASIC21.61■■□□□ 1.05
PMPCBO75439 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 AC003102.1-202ENST00000563394 1796 ntBASIC21.61■■□□□ 1.05
PMPCBO75439 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PMPCBO75439 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMPCBO75439 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.61■■□□□ 1.05
PMPCBO75439 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms