Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CNOT3O75175 LINC02228-203ENST00000641970 1355 ntBASIC20.59■□□□□ 0.89
CNOT3O75175 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT3O75175 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CNOT3O75175 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT3O75175 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.58■□□□□ 0.89
CNOT3O75175 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT3O75175 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.58■□□□□ 0.89
CNOT3O75175 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.58■□□□□ 0.89
CNOT3O75175 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT3O75175 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.58■□□□□ 0.89
CNOT3O75175 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.58■□□□□ 0.89
CNOT3O75175 AC068587.7-201ENST00000641602 218 ntBASIC20.58■□□□□ 0.89
CNOT3O75175 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT3O75175 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CNOT3O75175 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNOT3O75175 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CNOT3O75175 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNOT3O75175 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
CNOT3O75175 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 AC010141.3-201ENST00000456659 717 ntBASIC20.57■□□□□ 0.88
CNOT3O75175 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 AC022517.1-201ENST00000592429 346 ntBASIC20.57■□□□□ 0.88
CNOT3O75175 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNOT3O75175 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNOT3O75175 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT3O75175 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CNOT3O75175 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.56■□□□□ 0.88
CNOT3O75175 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNOT3O75175 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNOT3O75175 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT3O75175 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNOT3O75175 TPRG1LP1-201ENST00000598702 760 ntBASIC20.56■□□□□ 0.88
CNOT3O75175 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNOT3O75175 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT3O75175 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT3O75175 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.55■□□□□ 0.88
CNOT3O75175 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT3O75175 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT3O75175 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
CNOT3O75175 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT3O75175 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT3O75175 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CNOT3O75175 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CNOT3O75175 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT3O75175 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT3O75175 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CNOT3O75175 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CNOT3O75175 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT3O75175 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CNOT3O75175 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.55■□□□□ 0.88
CNOT3O75175 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.55■□□□□ 0.88
CNOT3O75175 SMUG1P1-201ENST00000590640 811 ntBASIC20.55■□□□□ 0.88
CNOT3O75175 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
CNOT3O75175 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.55■□□□□ 0.88
CNOT3O75175 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.55■□□□□ 0.88
CNOT3O75175 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CNOT3O75175 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT3O75175 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.54■□□□□ 0.88
CNOT3O75175 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT3O75175 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.54■□□□□ 0.88
CNOT3O75175 KRT18P61-201ENST00000585825 1298 ntBASIC20.54■□□□□ 0.88
CNOT3O75175 AC092437.1-201ENST00000624794 1048 ntBASIC20.54■□□□□ 0.88
CNOT3O75175 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CNOT3O75175 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT3O75175 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CNOT3O75175 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CNOT3O75175 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT3O75175 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT3O75175 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.53■□□□□ 0.88
CNOT3O75175 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CNOT3O75175 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT3O75175 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT3O75175 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT3O75175 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT3O75175 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNOT3O75175 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.53■□□□□ 0.88
CNOT3O75175 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.53■□□□□ 0.88
CNOT3O75175 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.53■□□□□ 0.88
CNOT3O75175 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms