Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF2O60811 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF2O60811 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEF2O60811 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEF2O60811 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.04■□□□□ 0.8
PRAMEF2O60811 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF2O60811 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF2O60811 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEF2O60811 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF2O60811 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF2O60811 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF2O60811 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF2O60811 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF2O60811 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF2O60811 AP004607.7-201ENST00000527152 1677 ntBASIC20.03■□□□□ 0.8
PRAMEF2O60811 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PRAMEF2O60811 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PRAMEF2O60811 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 AC004911.1-201ENST00000416316 871 ntBASIC20.02■□□□□ 0.8
PRAMEF2O60811 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF2O60811 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.02■□□□□ 0.8
PRAMEF2O60811 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF2O60811 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PRAMEF2O60811 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF2O60811 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF2O60811 C11orf96-202ENST00000528572 1834 ntBASIC20.02■□□□□ 0.79
PRAMEF2O60811 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF2O60811 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF2O60811 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF2O60811 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF2O60811 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF2O60811 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF2O60811 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF2O60811 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF2O60811 TPRG1LP1-201ENST00000598702 760 ntBASIC20.01■□□□□ 0.79
PRAMEF2O60811 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF2O60811 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF2O60811 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF2O60811 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF2O60811 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF2O60811 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF2O60811 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PRAMEF2O60811 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF2O60811 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF2O60811 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF2O60811 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20■□□□□ 0.79
PRAMEF2O60811 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20■□□□□ 0.79
PRAMEF2O60811 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF2O60811 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20■□□□□ 0.79
PRAMEF2O60811 BX005040.4-201ENST00000637145 1518 ntBASIC20■□□□□ 0.79
PRAMEF2O60811 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF2O60811 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF2O60811 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF2O60811 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF2O60811 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.98■□□□□ 0.79
PRAMEF2O60811 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.98■□□□□ 0.79
PRAMEF2O60811 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRAMEF2O60811 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF2O60811 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PRAMEF2O60811 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF2O60811 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PRAMEF2O60811 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF2O60811 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF2O60811 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.98■□□□□ 0.79
PRAMEF2O60811 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF2O60811 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms