Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
TSPAN3O60637 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.01■■□□□ 1.11
TSPAN3O60637 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN3O60637 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
TSPAN3O60637 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.01■■□□□ 1.11
TSPAN3O60637 AC006015.1-201ENST00000429970 570 ntBASIC22.01■■□□□ 1.11
TSPAN3O60637 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.01■■□□□ 1.11
TSPAN3O60637 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.01■■□□□ 1.11
TSPAN3O60637 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.01■■□□□ 1.11
TSPAN3O60637 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN3O60637 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN3O60637 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN3O60637 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN3O60637 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN3O60637 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN3O60637 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22■■□□□ 1.11
TSPAN3O60637 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 AC068473.5-201ENST00000616428 2072 ntBASIC22■■□□□ 1.11
TSPAN3O60637 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
TSPAN3O60637 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22■■□□□ 1.11
TSPAN3O60637 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22■■□□□ 1.11
TSPAN3O60637 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22■■□□□ 1.11
TSPAN3O60637 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
TSPAN3O60637 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22■■□□□ 1.11
TSPAN3O60637 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22■■□□□ 1.11
TSPAN3O60637 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
TSPAN3O60637 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN3O60637 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN3O60637 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
TSPAN3O60637 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.99■■□□□ 1.11
TSPAN3O60637 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN3O60637 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN3O60637 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.99■■□□□ 1.11
TSPAN3O60637 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TSPAN3O60637 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN3O60637 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN3O60637 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN3O60637 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN3O60637 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN3O60637 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN3O60637 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.98■■□□□ 1.11
TSPAN3O60637 AC092053.2-201ENST00000640557 1818 ntBASIC21.98■■□□□ 1.11
TSPAN3O60637 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN3O60637 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.97■■□□□ 1.11
TSPAN3O60637 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TSPAN3O60637 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.97■■□□□ 1.11
TSPAN3O60637 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.97■■□□□ 1.11
TSPAN3O60637 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.97■■□□□ 1.11
TSPAN3O60637 AP001160.3-201ENST00000601484 763 ntBASIC21.97■■□□□ 1.11
TSPAN3O60637 AC080038.1-201ENST00000611274 1154 ntBASIC21.97■■□□□ 1.11
TSPAN3O60637 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TSPAN3O60637 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.97■■□□□ 1.11
TSPAN3O60637 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.97■■□□□ 1.11
TSPAN3O60637 AC233723.2-201ENST00000623798 2106 ntBASIC21.97■■□□□ 1.11
TSPAN3O60637 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN3O60637 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
TSPAN3O60637 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.96■■□□□ 1.11
TSPAN3O60637 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN3O60637 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
TSPAN3O60637 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.96■■□□□ 1.11
TSPAN3O60637 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.95■■□□□ 1.1
TSPAN3O60637 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN3O60637 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN3O60637 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.95■■□□□ 1.1
TSPAN3O60637 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms