Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.41■■□□□ 1.82
GRIN3BO60391 AC012618.2-201ENST00000428058 849 ntBASIC26.41■■□□□ 1.82
GRIN3BO60391 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
GRIN3BO60391 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.41■■□□□ 1.82
GRIN3BO60391 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.41■■□□□ 1.82
GRIN3BO60391 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
GRIN3BO60391 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
GRIN3BO60391 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
GRIN3BO60391 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.4■■□□□ 1.82
GRIN3BO60391 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
GRIN3BO60391 AC087499.1-201ENST00000418141 1075 ntBASIC26.4■■□□□ 1.82
GRIN3BO60391 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.4■■□□□ 1.82
GRIN3BO60391 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
GRIN3BO60391 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
GRIN3BO60391 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
GRIN3BO60391 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.4■■□□□ 1.82
GRIN3BO60391 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
GRIN3BO60391 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
GRIN3BO60391 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
GRIN3BO60391 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
GRIN3BO60391 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
GRIN3BO60391 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.39■■□□□ 1.82
GRIN3BO60391 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.39■■□□□ 1.82
GRIN3BO60391 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.39■■□□□ 1.82
GRIN3BO60391 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.39■■□□□ 1.82
GRIN3BO60391 AL591742.1-201ENST00000604433 565 ntBASIC26.39■■□□□ 1.82
GRIN3BO60391 AC012306.2-201ENST00000609350 630 ntBASIC26.39■■□□□ 1.82
GRIN3BO60391 HLA-B-256ENST00000639848 1089 ntBASIC26.39■■□□□ 1.82
GRIN3BO60391 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
GRIN3BO60391 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.39■■□□□ 1.81
GRIN3BO60391 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
GRIN3BO60391 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
GRIN3BO60391 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
GRIN3BO60391 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.38■■□□□ 1.81
GRIN3BO60391 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.38■■□□□ 1.81
GRIN3BO60391 AC233702.5-201ENST00000584107 538 ntBASIC26.38■■□□□ 1.81
GRIN3BO60391 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.38■■□□□ 1.81
GRIN3BO60391 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
GRIN3BO60391 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
GRIN3BO60391 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
GRIN3BO60391 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GRIN3BO60391 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.37■■□□□ 1.81
GRIN3BO60391 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GRIN3BO60391 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GRIN3BO60391 TMPOP1-202ENST00000424642 1267 ntBASIC26.37■■□□□ 1.81
GRIN3BO60391 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.37■■□□□ 1.81
GRIN3BO60391 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.37■■□□□ 1.81
GRIN3BO60391 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.37■■□□□ 1.81
GRIN3BO60391 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.37■■□□□ 1.81
GRIN3BO60391 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
GRIN3BO60391 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.37■■□□□ 1.81
GRIN3BO60391 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GRIN3BO60391 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GRIN3BO60391 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC26.36■■□□□ 1.81
GRIN3BO60391 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
GRIN3BO60391 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.36■■□□□ 1.81
GRIN3BO60391 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.36■■□□□ 1.81
GRIN3BO60391 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.36■■□□□ 1.81
GRIN3BO60391 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3BO60391 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.35■■□□□ 1.81
GRIN3BO60391 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.35■■□□□ 1.81
GRIN3BO60391 DUSP8P5-201ENST00000422884 1815 ntBASIC26.35■■□□□ 1.81
GRIN3BO60391 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
GRIN3BO60391 TSPY7P-201ENST00000431358 1114 ntBASIC26.35■■□□□ 1.81
GRIN3BO60391 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3BO60391 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.35■■□□□ 1.81
GRIN3BO60391 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC26.35■■□□□ 1.81
GRIN3BO60391 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3BO60391 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GRIN3BO60391 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GRIN3BO60391 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
GRIN3BO60391 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
GRIN3BO60391 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.34■■□□□ 1.81
GRIN3BO60391 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.34■■□□□ 1.81
GRIN3BO60391 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.34■■□□□ 1.81
GRIN3BO60391 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.34■■□□□ 1.81
GRIN3BO60391 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
GRIN3BO60391 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
GRIN3BO60391 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.33■■□□□ 1.81
GRIN3BO60391 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GRIN3BO60391 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GRIN3BO60391 RPS2P55-201ENST00000397318 883 ntBASIC26.33■■□□□ 1.81
GRIN3BO60391 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.33■■□□□ 1.81
GRIN3BO60391 AC107956.1-201ENST00000494359 873 ntBASIC26.33■■□□□ 1.81
GRIN3BO60391 EEF1DP3-203ENST00000566025 782 ntBASIC26.33■■□□□ 1.81
GRIN3BO60391 CD177P1-201ENST00000606252 935 ntBASIC26.33■■□□□ 1.81
GRIN3BO60391 AC120498.10-201ENST00000621827 505 ntBASIC26.33■■□□□ 1.81
GRIN3BO60391 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.33■■□□□ 1.81
GRIN3BO60391 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
GRIN3BO60391 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.33■■□□□ 1.8
GRIN3BO60391 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GRIN3BO60391 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
GRIN3BO60391 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.32■■□□□ 1.8
GRIN3BO60391 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
GRIN3BO60391 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.32■■□□□ 1.8
GRIN3BO60391 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.32■■□□□ 1.8
GRIN3BO60391 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.32■■□□□ 1.8
GRIN3BO60391 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.32■■□□□ 1.8
GRIN3BO60391 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
GRIN3BO60391 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms