Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA12O60330 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA12O60330 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA12O60330 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA12O60330 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA12O60330 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 KRT18P6-201ENST00000555540 1265 ntBASIC21.14■□□□□ 0.97
PCDHGA12O60330 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 MYCNOS-205ENST00000641950 531 ntBASIC21.14■□□□□ 0.97
PCDHGA12O60330 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA12O60330 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA12O60330 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA12O60330 EP400NL-214ENST00000641289 2402 ntBASIC21.13■□□□□ 0.97
PCDHGA12O60330 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA12O60330 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 TSPY20P-201ENST00000450910 630 ntBASIC21.13■□□□□ 0.97
PCDHGA12O60330 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 AP001160.3-201ENST00000601484 763 ntBASIC21.13■□□□□ 0.97
PCDHGA12O60330 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA12O60330 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA12O60330 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA12O60330 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA12O60330 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA12O60330 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA12O60330 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA12O60330 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA12O60330 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGA12O60330 SLC29A4P1-201ENST00000398760 971 ntBASIC21.12■□□□□ 0.97
PCDHGA12O60330 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA12O60330 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHGA12O60330 AC233723.2-201ENST00000623798 2106 ntBASIC21.12■□□□□ 0.97
PCDHGA12O60330 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDHGA12O60330 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA12O60330 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGA12O60330 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA12O60330 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGA12O60330 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGA12O60330 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA12O60330 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA12O60330 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA12O60330 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA12O60330 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHGA12O60330 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA12O60330 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA12O60330 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA12O60330 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGA12O60330 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA12O60330 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGA12O60330 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA12O60330 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA12O60330 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA12O60330 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGA12O60330 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGA12O60330 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGA12O60330 AL138781.1-201ENST00000566567 1274 ntBASIC21.09■□□□□ 0.97
PCDHGA12O60330 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGA12O60330 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGA12O60330 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms