Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NCK2O43639 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
NCK2O43639 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
NCK2O43639 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NCK2O43639 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.55■■□□□ 1.36
NCK2O43639 AL355802.2-201ENST00000402069 882 ntBASIC23.55■■□□□ 1.36
NCK2O43639 NCF1B-203ENST00000435988 1254 ntBASIC23.55■■□□□ 1.36
NCK2O43639 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.55■■□□□ 1.36
NCK2O43639 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.55■■□□□ 1.36
NCK2O43639 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
NCK2O43639 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
NCK2O43639 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
NCK2O43639 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.54■■□□□ 1.36
NCK2O43639 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NCK2O43639 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NCK2O43639 KRT19P1-201ENST00000405746 1186 ntBASIC23.54■■□□□ 1.36
NCK2O43639 KRT18P11-201ENST00000435214 1283 ntBASIC23.54■■□□□ 1.36
NCK2O43639 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.54■■□□□ 1.36
NCK2O43639 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
NCK2O43639 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NCK2O43639 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NCK2O43639 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
NCK2O43639 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
NCK2O43639 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
NCK2O43639 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.53■■□□□ 1.36
NCK2O43639 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NCK2O43639 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NCK2O43639 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.53■■□□□ 1.36
NCK2O43639 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.53■■□□□ 1.36
NCK2O43639 DUX4L4-201ENST00000566884 1269 ntBASIC23.53■■□□□ 1.36
NCK2O43639 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.53■■□□□ 1.36
NCK2O43639 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
NCK2O43639 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NCK2O43639 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
NCK2O43639 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NCK2O43639 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
NCK2O43639 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NCK2O43639 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
NCK2O43639 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.52■■□□□ 1.36
NCK2O43639 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.52■■□□□ 1.36
NCK2O43639 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
NCK2O43639 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.52■■□□□ 1.36
NCK2O43639 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.52■■□□□ 1.36
NCK2O43639 KRT18P61-201ENST00000585825 1298 ntBASIC23.52■■□□□ 1.36
NCK2O43639 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.52■■□□□ 1.36
NCK2O43639 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NCK2O43639 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 AP004607.4-201ENST00000530158 1459 ntBASIC23.51■■□□□ 1.35
NCK2O43639 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
NCK2O43639 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 CROCCP5-201ENST00000436658 830 ntBASIC23.51■■□□□ 1.35
NCK2O43639 TPRG1LP1-201ENST00000598702 760 ntBASIC23.51■■□□□ 1.35
NCK2O43639 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.51■■□□□ 1.35
NCK2O43639 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NCK2O43639 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NCK2O43639 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.5■■□□□ 1.35
NCK2O43639 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
NCK2O43639 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NCK2O43639 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
NCK2O43639 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
NCK2O43639 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NCK2O43639 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.5■■□□□ 1.35
NCK2O43639 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.49■■□□□ 1.35
NCK2O43639 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
NCK2O43639 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NCK2O43639 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NCK2O43639 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NCK2O43639 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.49■■□□□ 1.35
NCK2O43639 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.49■■□□□ 1.35
NCK2O43639 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NCK2O43639 C11orf96-202ENST00000528572 1834 ntBASIC23.49■■□□□ 1.35
NCK2O43639 AC092053.2-201ENST00000640557 1818 ntBASIC23.49■■□□□ 1.35
NCK2O43639 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NCK2O43639 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NCK2O43639 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NCK2O43639 AC087742.1-201ENST00000575880 1738 ntBASIC23.48■■□□□ 1.35
NCK2O43639 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
NCK2O43639 GPX1P1-201ENST00000388829 606 ntBASIC23.48■■□□□ 1.35
NCK2O43639 CD99P1-205ENST00000527459 561 ntBASIC23.48■■□□□ 1.35
NCK2O43639 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NCK2O43639 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
NCK2O43639 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.47■■□□□ 1.35
NCK2O43639 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NCK2O43639 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms