Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XRCC2O43543 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC2O43543 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.52■□□□□ 0.56
XRCC2O43543 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC2O43543 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
XRCC2O43543 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC2O43543 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
XRCC2O43543 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.52■□□□□ 0.56
XRCC2O43543 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.52■□□□□ 0.56
XRCC2O43543 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC2O43543 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
XRCC2O43543 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC2O43543 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.52■□□□□ 0.56
XRCC2O43543 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XRCC2O43543 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC2O43543 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC2O43543 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.52■□□□□ 0.55
XRCC2O43543 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC2O43543 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC2O43543 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
XRCC2O43543 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC2O43543 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
XRCC2O43543 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC2O43543 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC2O43543 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC2O43543 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.51■□□□□ 0.55
XRCC2O43543 AP001330.3-201ENST00000520123 633 ntBASIC18.51■□□□□ 0.55
XRCC2O43543 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.51■□□□□ 0.55
XRCC2O43543 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
XRCC2O43543 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
XRCC2O43543 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.51■□□□□ 0.55
XRCC2O43543 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC2O43543 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC2O43543 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.51■□□□□ 0.55
XRCC2O43543 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XRCC2O43543 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.5■□□□□ 0.55
XRCC2O43543 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
XRCC2O43543 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.5■□□□□ 0.55
XRCC2O43543 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.5■□□□□ 0.55
XRCC2O43543 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 SMUG1P1-201ENST00000590640 811 ntBASIC18.5■□□□□ 0.55
XRCC2O43543 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.5■□□□□ 0.55
XRCC2O43543 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.5■□□□□ 0.55
XRCC2O43543 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XRCC2O43543 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
XRCC2O43543 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.49■□□□□ 0.55
XRCC2O43543 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 AC091305.1-201ENST00000479476 895 ntBASIC18.49■□□□□ 0.55
XRCC2O43543 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
XRCC2O43543 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.49■□□□□ 0.55
XRCC2O43543 RASA4CP-201ENST00000424092 1398 ntBASIC18.49■□□□□ 0.55
XRCC2O43543 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
XRCC2O43543 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.49■□□□□ 0.55
XRCC2O43543 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
XRCC2O43543 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.49■□□□□ 0.55
XRCC2O43543 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.49■□□□□ 0.55
XRCC2O43543 TSPY26P-201ENST00000476365 1326 ntBASIC18.49■□□□□ 0.55
XRCC2O43543 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 AL137060.1-201ENST00000618151 2648 ntBASIC18.48■□□□□ 0.55
XRCC2O43543 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.48■□□□□ 0.55
XRCC2O43543 MIR939-201ENST00000401314 82 ntBASIC18.48■□□□□ 0.55
XRCC2O43543 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.48■□□□□ 0.55
XRCC2O43543 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.48■□□□□ 0.55
XRCC2O43543 AF213884.3-201ENST00000563833 479 ntBASIC18.48■□□□□ 0.55
XRCC2O43543 AL139246.5-201ENST00000606645 996 ntBASIC18.48■□□□□ 0.55
XRCC2O43543 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XRCC2O43543 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.47■□□□□ 0.55
XRCC2O43543 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.47■□□□□ 0.55
XRCC2O43543 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms