Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYRM1O43325 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LYRM1O43325 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.34■□□□□ 0.53
LYRM1O43325 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LYRM1O43325 LINC01529-204ENST00000636474 1715 ntBASIC18.34■□□□□ 0.53
LYRM1O43325 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM1O43325 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYRM1O43325 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYRM1O43325 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.33■□□□□ 0.53
LYRM1O43325 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.33■□□□□ 0.53
LYRM1O43325 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.33■□□□□ 0.53
LYRM1O43325 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LYRM1O43325 AC073314.1-201ENST00000568729 2216 ntBASIC18.33■□□□□ 0.53
LYRM1O43325 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYRM1O43325 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYRM1O43325 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.33■□□□□ 0.52
LYRM1O43325 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LYRM1O43325 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LYRM1O43325 AC104564.3-201ENST00000582367 638 ntBASIC18.33■□□□□ 0.52
LYRM1O43325 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.33■□□□□ 0.52
LYRM1O43325 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LYRM1O43325 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.33■□□□□ 0.52
LYRM1O43325 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYRM1O43325 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.33■□□□□ 0.52
LYRM1O43325 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.33■□□□□ 0.52
LYRM1O43325 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.33■□□□□ 0.52
LYRM1O43325 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LYRM1O43325 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYRM1O43325 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYRM1O43325 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYRM1O43325 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYRM1O43325 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.32■□□□□ 0.52
LYRM1O43325 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 AL049796.1-201ENST00000565336 1766 ntBASIC18.32■□□□□ 0.52
LYRM1O43325 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
LYRM1O43325 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 ZNRF2P2-203ENST00000454624 420 ntBASIC18.32■□□□□ 0.52
LYRM1O43325 AC087393.1-201ENST00000582896 145 ntBASIC18.32■□□□□ 0.52
LYRM1O43325 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.32■□□□□ 0.52
LYRM1O43325 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
LYRM1O43325 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.32■□□□□ 0.52
LYRM1O43325 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LYRM1O43325 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYRM1O43325 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYRM1O43325 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
LYRM1O43325 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
LYRM1O43325 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYRM1O43325 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LYRM1O43325 MIR3648-2-201ENST00000581792 180 ntBASIC18.31■□□□□ 0.52
LYRM1O43325 MIR3648-1-201ENST00000615959 180 ntBASIC18.31■□□□□ 0.52
LYRM1O43325 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.31■□□□□ 0.52
LYRM1O43325 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYRM1O43325 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LYRM1O43325 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYRM1O43325 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYRM1O43325 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.31■□□□□ 0.52
LYRM1O43325 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.31■□□□□ 0.52
LYRM1O43325 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.31■□□□□ 0.52
LYRM1O43325 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.31■□□□□ 0.52
LYRM1O43325 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
LYRM1O43325 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LYRM1O43325 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYRM1O43325 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYRM1O43325 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LYRM1O43325 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.3■□□□□ 0.52
LYRM1O43325 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.3■□□□□ 0.52
LYRM1O43325 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
LYRM1O43325 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LYRM1O43325 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.3■□□□□ 0.52
LYRM1O43325 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LYRM1O43325 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYRM1O43325 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.3■□□□□ 0.52
LYRM1O43325 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms