Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
MEIS3P1A6NDR6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.24■□□□□ 0.51
MEIS3P1A6NDR6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MEIS3P1A6NDR6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
MEIS3P1A6NDR6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MEIS3P1A6NDR6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MEIS3P1A6NDR6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 ABHD17AP5-201ENST00000580133 923 ntBASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 KRT8P33-201ENST00000508125 1423 ntBASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 RNF165-205ENST00000588679 2904 ntBASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MEIS3P1A6NDR6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 MIR4508-201ENST00000584178 70 ntBASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MEIS3P1A6NDR6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 MIR6722-201ENST00000617286 78 ntBASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 AC009102.2-201ENST00000606772 1639 ntBASIC18.2■□□□□ 0.5
MEIS3P1A6NDR6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 PCDHAC2-203ENST00000615316 3011 ntBASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MEIS3P1A6NDR6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 AC104564.3-201ENST00000582367 638 ntBASIC18.18■□□□□ 0.5
MEIS3P1A6NDR6 AC137630.3-201ENST00000607245 391 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms