Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CCDC144AA2RUR9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC144AA2RUR9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 AL355802.2-201ENST00000402069 882 ntBASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 GUSBP6-202ENST00000438529 1198 ntBASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC144AA2RUR9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 GPX1P1-201ENST00000388829 606 ntBASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 SLC7A5P2-201ENST00000553010 536 ntBASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 SLC7A5P1-201ENST00000568957 537 ntBASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC144AA2RUR9 AC127496.7-201ENST00000625110 1798 ntBASIC30.89■■■□□ 2.54
CCDC144AA2RUR9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC30.89■■■□□ 2.54
CCDC144AA2RUR9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.89■■■□□ 2.54
CCDC144AA2RUR9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC144AA2RUR9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC30.89■■■□□ 2.53
CCDC144AA2RUR9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
CCDC144AA2RUR9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CCDC144AA2RUR9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 C1orf229-201ENST00000623686 2258 ntBASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC30.88■■■□□ 2.53
CCDC144AA2RUR9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 AL121832.2-201ENST00000610979 668 ntBASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC144AA2RUR9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 APTR-203ENST00000430801 583 ntTSL 5 BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC144AA2RUR9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 AC013268.1-206ENST00000638368 961 ntBASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 AC112229.1-201ENST00000639295 961 ntBASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 AC080038.3-201ENST00000623346 1952 ntBASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC144AA2RUR9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC144AA2RUR9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 C9orf163-202ENST00000624034 2573 ntBASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 TSPY6P-201ENST00000448518 926 ntBASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC30.83■■■□□ 2.53
CCDC144AA2RUR9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.82■■■□□ 2.52
CCDC144AA2RUR9 AC142086.2-201ENST00000569753 217 ntBASIC30.82■■■□□ 2.52
CCDC144AA2RUR9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC144AA2RUR9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms