Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.84■■■□□ 2.69
HFM1A2PYH4 MFSD11-216ENST00000590393 1141 ntBASIC31.84■■■□□ 2.69
HFM1A2PYH4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HFM1A2PYH4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HFM1A2PYH4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HFM1A2PYH4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
HFM1A2PYH4 ECEL1P1-201ENST00000373592 1742 ntBASIC31.84■■■□□ 2.69
HFM1A2PYH4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HFM1A2PYH4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.83■■■□□ 2.69
HFM1A2PYH4 AP001160.3-201ENST00000601484 763 ntBASIC31.83■■■□□ 2.69
HFM1A2PYH4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC31.83■■■□□ 2.69
HFM1A2PYH4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
HFM1A2PYH4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC31.83■■■□□ 2.69
HFM1A2PYH4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
HFM1A2PYH4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
HFM1A2PYH4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HFM1A2PYH4 AC016769.1-201ENST00000409132 1010 ntBASIC31.83■■■□□ 2.69
HFM1A2PYH4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.83■■■□□ 2.69
HFM1A2PYH4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
HFM1A2PYH4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
HFM1A2PYH4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC31.82■■■□□ 2.68
HFM1A2PYH4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
HFM1A2PYH4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
HFM1A2PYH4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC31.82■■■□□ 2.68
HFM1A2PYH4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
HFM1A2PYH4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.82■■■□□ 2.68
HFM1A2PYH4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC31.81■■■□□ 2.68
HFM1A2PYH4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
HFM1A2PYH4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
HFM1A2PYH4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
HFM1A2PYH4 AC012676.1-201ENST00000574705 1949 ntBASIC31.81■■■□□ 2.68
HFM1A2PYH4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC31.8■■■□□ 2.68
HFM1A2PYH4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
HFM1A2PYH4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC31.8■■■□□ 2.68
HFM1A2PYH4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
HFM1A2PYH4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
HFM1A2PYH4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
HFM1A2PYH4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
HFM1A2PYH4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC31.79■■■□□ 2.68
HFM1A2PYH4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
HFM1A2PYH4 KRT18P11-201ENST00000435214 1283 ntBASIC31.79■■■□□ 2.68
HFM1A2PYH4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
HFM1A2PYH4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC31.79■■■□□ 2.68
HFM1A2PYH4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC31.79■■■□□ 2.68
HFM1A2PYH4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
HFM1A2PYH4 AC073111.5-205ENST00000641717 521 ntBASIC31.79■■■□□ 2.68
HFM1A2PYH4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
HFM1A2PYH4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
HFM1A2PYH4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HFM1A2PYH4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC31.78■■■□□ 2.68
HFM1A2PYH4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HFM1A2PYH4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
HFM1A2PYH4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
HFM1A2PYH4 MYCNOS-205ENST00000641950 531 ntBASIC31.78■■■□□ 2.68
HFM1A2PYH4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HFM1A2PYH4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
HFM1A2PYH4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
HFM1A2PYH4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
HFM1A2PYH4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
HFM1A2PYH4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
HFM1A2PYH4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC31.77■■■□□ 2.68
HFM1A2PYH4 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.77■■■□□ 2.68
HFM1A2PYH4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC31.77■■■□□ 2.68
HFM1A2PYH4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
HFM1A2PYH4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
HFM1A2PYH4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.76■■■□□ 2.68
HFM1A2PYH4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.76■■■□□ 2.68
HFM1A2PYH4 BID-214ENST00000617586 542 ntTSL 5 BASIC31.76■■■□□ 2.68
HFM1A2PYH4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
HFM1A2PYH4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
HFM1A2PYH4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
HFM1A2PYH4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.75■■■□□ 2.67
HFM1A2PYH4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
HFM1A2PYH4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.75■■■□□ 2.67
HFM1A2PYH4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
HFM1A2PYH4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
HFM1A2PYH4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
HFM1A2PYH4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
HFM1A2PYH4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
HFM1A2PYH4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
HFM1A2PYH4 CDCA4P2-201ENST00000441182 718 ntBASIC31.75■■■□□ 2.67
HFM1A2PYH4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.75■■■□□ 2.67
HFM1A2PYH4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.75■■■□□ 2.67
HFM1A2PYH4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.75■■■□□ 2.67
HFM1A2PYH4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.75■■■□□ 2.67
HFM1A2PYH4 KRT18P20-201ENST00000548986 1279 ntBASIC31.75■■■□□ 2.67
HFM1A2PYH4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
HFM1A2PYH4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
HFM1A2PYH4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC31.74■■■□□ 2.67
HFM1A2PYH4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.74■■■□□ 2.67
HFM1A2PYH4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.74■■■□□ 2.67
HFM1A2PYH4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
HFM1A2PYH4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms