Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AL137060.1-201ENST00000618151 2648 ntBASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC087239.1-201ENST00000622671 572 ntBASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AL031602.1-201ENST00000633169 911 ntBASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC068587.7-201ENST00000641602 218 ntBASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 LINC02228-203ENST00000641970 1355 ntBASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.08■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC010542.4-201ENST00000563151 1910 ntBASIC17.08■□□□□ 0.33
TCRBV4S1A1TA0A5B7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.08■□□□□ 0.33
TCRBV4S1A1TA0A5B7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms