Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 MTDHP2-201ENST00000601468 714 ntBASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 AC241377.3-202ENST00000626088 1088 ntBASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 AC241585.3-202ENST00000628937 1088 ntBASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 AC245100.8-202ENST00000629247 1058 ntBASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV27A0A0K0K1C4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRBV27A0A0K0K1C4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV27A0A0K0K1C4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRBV27A0A0K0K1C4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TRBV27A0A0K0K1C4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRBV27A0A0K0K1C4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV27A0A0K0K1C4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV27A0A0K0K1C4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
TRBV27A0A0K0K1C4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 AC012354.3-201ENST00000623734 483 ntBASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms