Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC067863.2-201ENST00000559120 1980 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 LINC01913-201ENST00000398796 1810 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 FSHB-201ENST00000254122 1698 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC131212.2-201ENST00000622917 1355 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 MOB4-202ENST00000323303 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 SLC38A11-201ENST00000303735 3737 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 DDX11-AS1-201ENST00000500527 2031 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC022148.1-201ENST00000316807 3267 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 PARK7-202ENST00000377488 783 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 JPT2-202ENST00000382710 962 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 KRTAP4-9-201ENST00000391415 1157 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AL591503.3-201ENST00000423038 635 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC121251.1-201ENST00000451481 249 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 RPSAP3-201ENST00000464073 887 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 RN7SL521P-201ENST00000488398 297 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AP001979.1-201ENST00000529222 751 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC010551.1-201ENST00000568458 469 ntTSL 4 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 MT1F-204ENST00000568475 416 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC011444.2-201ENST00000587759 567 ntTSL 4 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC016737.1-201ENST00000605739 1068 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC092471.2-201ENST00000637219 651 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 RBFOX2-210ENST00000449924 1935 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 LINC01977-201ENST00000576963 1788 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 CHRNB3-201ENST00000289957 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 C1orf127-201ENST00000377004 2761 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AL356273.3-201ENST00000623474 1989 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 CD209-206ENST00000394173 1313 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AL358933.1-201ENST00000565046 2830 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 CCT6B-202ENST00000421975 1680 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 MSS51-202ENST00000372912 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO3Q8TAP4 AC004584.3-201ENST00000572877 2356 ntBASIC12.32□□□□□ -0.44
LMO3Q8TAP4 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 VRTN-201ENST00000256362 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 NAP1L3-201ENST00000373079 2639 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 LINC01391-203ENST00000495287 3538 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 IL18-201ENST00000280357 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 GSTM2-202ENST00000369827 1073 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 SPANXA2-201ENST00000370518 691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 SPANXA1-201ENST00000370519 691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 KRTAP4-11-201ENST00000391413 1180 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 RPL23-204ENST00000394333 444 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 RPL23P8-201ENST00000405810 428 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 LINC01518-201ENST00000411439 519 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 ADIPOR1P1-201ENST00000435632 1074 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 DANT1-202ENST00000451869 444 ntTSL 3 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 FAM86DP-202ENST00000477247 995 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 RN7SL328P-201ENST00000484033 300 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AC113410.2-201ENST00000507389 678 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 MIR3945HG-201ENST00000510284 576 ntTSL 4 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AC025284.1-201ENST00000564358 579 ntTSL 4 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AC009171.2-201ENST00000573220 318 ntTSL 3 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AC015563.1-201ENST00000581134 468 ntTSL 3 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AC020658.5-201ENST00000622487 442 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 SATB1-AS1-262ENST00000629984 759 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 Z98752.4-201ENST00000635579 588 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 POM121L6P-201ENST00000441186 1826 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 FAM221A-201ENST00000344962 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 KNSTRN-216ENST00000608100 1495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AL079342.3-201ENST00000624924 2061 ntBASIC12.31□□□□□ -0.44
LMO3Q8TAP4 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms